PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do023667.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 337aa    MW: 37350.1 Da    PI: 7.5033
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do023667.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.22e-097798425
                XCHHHCHHHHHHHHHHHHHHHH CS
      bZIP_1  4 lkrerrkqkNReAArrsRqRKk 25
                +k++rr+++NReAAr+sR RKk
  Do023667.1 77 WKVQRRLAQNREAARKSRMRKK 98
                9********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001701.7E-67698IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.89E-677119No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-57899No hitNo description
PROSITE patternPS0003608196IPR004827Basic-leucine zipper domain
PfamPF141447.8E-29134209IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MAPPGMATAD EGRFCLLRAA AAAAGAQFEN WGDSDIVVTS PLTETTCTDA DDVSGDKQHA  60
QMVCAQGFFL IRVLLPWKVQ RRLAQNREAA RKSRMRKKVI LALLYHLLSV ATCNYCALAF  120
DLEYARWLDE HQRHMTDLRV ALGAQIGDDD LRLLVDGVMV HYEQMFRLKG LATRADVFHV  180
LSGMWMSPAE RFFMWLGGFR SSELLKVLLS GHVEPLTEQQ LVGICSLQQS SQQAEDALSQ  240
GMEALQQALA DTLAAAAAAG AGPDGVTSYM GQMAVAMGKL ATVENFLRQA DLLRQQTLQQ  300
MRRILTTRQA ARALLVVSDY FSRLRALSSL WLTRPRD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo023667.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9719680.0EU971968.1 Zea mays clone 372950 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025812128.11e-168transcription factor TGAL3-like
SwissprotQ5Z6N91e-140TGAL3_ORYSJ; Transcription factor TGAL3
TrEMBLA0A1E5UUH00.0A0A1E5UUH0_9POAL; Transcription factor HBP-1b(C1)
STRINGPavir.J20659.1.p1e-164(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.15e-88bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]