PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do018112.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 518aa    MW: 57834.3 Da    PI: 8.1098
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do018112.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.73.7e-11208251141
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                 e++ k  rr+++NReAAr+sR+RKka+i++Le    + ++Le+e
  Do018112.1 208 ERDPKTLRRLAQNREAARKSRLRKKAYIQQLESsriRLAQLEQE 251
                 6777999************************9633355555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.0E-8202256No hitNo description
SMARTSM003385.6E-8208273IPR004827Basic-leucine zipper domain
PfamPF001703.5E-8209251IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.082210252IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.7E-7213254No hitNo description
PROSITE patternPS000360215230IPR004827Basic-leucine zipper domain
PfamPF141446.6E-28308382IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    Send to blast
MASGGGMKEQ EMNISFGMMN HHHHHHHHHQ APSSSSSSSM HAAAASFIVY FISSVLKSCA  60
NHITYYYIFI YMNVSVAQSR SGKEAASGAY DHLGELDQAL FMYLDHGSSH GAAMHHQEQR  120
RKCVVFLSPA PVGSKQPRSP QDHHHHQQAA MEELAGSRRL QQEHHHLQHQ PFAAAAAGGA  180
EPAAAGMIKD VKPPLAKKDH RRSSSTAERD PKTLRRLAQN REAARKSRLR KKAYIQQLES  240
SRIRLAQLEQ ELHTARAQGV FFPNSGLLAD QGVSGKGVPI GGIDGLSSEA AMFDVEYGRW  300
QEEHYRLMYE LRAALQQHLP EGELQMYVES CLSHHDEMLG IKEGAIKGDV FHLISGVWRS  360
PAERCFLWLG GFRPSEVIKM LLSHVEPLTE QQIVGVYGLQ QSALETEEAL SQGLDALYQS  420
LSDTVVSDAL SCPSNVANYM GQMAAAMNKL STLEGFVRQA ENLRHQTLHR LHQILTTRQM  480
ARSLLAVSDY FHRLRTLSSL WVTRPRAPQE QQQQQGHS
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo018112.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9669280.0EU966928.1 Zea mays clone 298194 DNA binding protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008651077.10.0putative bZIP transcription factor superfamily protein isoform X1
SwissprotQ52MZ21e-158TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A1E5V7Z70.0A0A1E5V7Z7_9POAL; Transcription factor HBP-1b(C38)
STRINGGRMZM2G006578_P030.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78763543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.11e-138bZIP family protein