PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do015790.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family ERF
Protein Properties Length: 329aa    MW: 35058.8 Da    PI: 6.2691
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do015790.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.74.9e-071381701651
         AP2  16 vAeIrdpseng.krkrfslgkfgtaeeAakaaiaark 51 
                 vA ++d    g  r++++lg++ t eeAa a++a ++
  Do015790.1 138 VATVWD----GqARRSIWLGSYETSEEAAYAYDAGAR 170
                 677777....6567*******************9776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.246112182IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-9133182IPR016177DNA-binding domain
SMARTSM003803.5E-4135188IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.3E-12138183IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MEKEGGAPPG RELPPRPAVE EVEAAATVLA SADVEEEARL AEIAGKEARP VPSVPAQLLD  60
VLREAKRNTV SLRALLQRKE AAHVVELERR FKVFDDLIQR ASRVVSXGDG GGGDGVVIVD  120
KDRKGDMNLK FDNTRRAVAT VWDGQARRSI WLGSYETSEE AAYAYDAGAR TVQGRWARPN  180
FPEPSARAAA RAVDATAAEV LTDLARLRRA QEPAAAHNFL PQPTPRPQAP YFHSWAPAPA  240
PAGAAQHHQR AAPSFFYRSG AAYGAAFFAG TFVPGVYVVP NHPASSALSS SGPIFTSTTA  300
MGPDQSVVGD NFTDDVASSS VAPTYGEAQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo015790.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9567713e-80EU956771.1 Zea mays clone 1573266 protein lap4 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1E5VAL20.0A0A1E5VAL2_9POAL; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP17311610
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.18e-08ERF family protein