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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do015555.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
NAC |
Protein Properties |
Length: 255aa MW: 27590.6 Da PI: 7.1247 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do015555.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 37.8 | 5.7e-12 | 1 | 28 | 102 | 129 |
NAM 102 lkktLvfykgrapkgektdWvmheyrle 129
+kktLvfy grapkg+kt+Wvmhe+rle
Do015555.1 1 MKKTLVFYMGRAPKGSKTNWVMHEFRLE 28
8************************985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 255 aa
Download sequence Send
to blast |
MKKTLVFYMG RAPKGSKTNW VMHEFRLEGS SRHNNGNLRF NPKDEWVVCK VHHKNGEAKK 60 PAEEYSAGTP NVSSVVSDDA VEGDEFLDSM IDPMFFYSAA SSLPSTTTTI NAVAPHNTDY 120 PISSTAAGAS TAATSSFVNR LPSYDSFNDT RSIINNLHQV ALPNPAAPTN STSSHSSSWN 180 MLHHADQNQA MGSSYNLHHQ AMVAKALGGI ISPNCAGSLP SSSFTAGMML QQNSMGMPQQ 240 KLENYGESYG NSSYK
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-14 | 1 | 60 | 116 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-14 | 1 | 60 | 116 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-14 | 1 | 60 | 116 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-14 | 1 | 60 | 116 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-14 | 1 | 60 | 119 | 174 | NAC domain-containing protein 19 |
3swm_B | 2e-14 | 1 | 60 | 119 | 174 | NAC domain-containing protein 19 |
3swm_C | 2e-14 | 1 | 60 | 119 | 174 | NAC domain-containing protein 19 |
3swm_D | 2e-14 | 1 | 60 | 119 | 174 | NAC domain-containing protein 19 |
3swp_A | 2e-14 | 1 | 60 | 119 | 174 | NAC domain-containing protein 19 |
3swp_B | 2e-14 | 1 | 60 | 119 | 174 | NAC domain-containing protein 19 |
3swp_C | 2e-14 | 1 | 60 | 119 | 174 | NAC domain-containing protein 19 |
3swp_D | 2e-14 | 1 | 60 | 119 | 174 | NAC domain-containing protein 19 |
4dul_A | 2e-14 | 1 | 60 | 116 | 171 | NAC domain-containing protein 19 |
4dul_B | 2e-14 | 1 | 60 | 116 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | KC840942 | 9e-46 | KC840942.1 UNVERIFIED: Miscanthus lutarioriparius NAC13-like mRNA, complete sequence. |