PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Do015291.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family | bZIP | ||||||||
Protein Properties | Length: 140aa MW: 15511.6 Da PI: 8.4751 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.3 | 2.9e-12 | 37 | 95 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +rk++NR++A+rsR+RK+ +++ L+ v++L a N a++ + ++ +a++++e+ Do015291.1 37 RKRKRKESNRLSAQRSRARKQRQLDDLTAQVAALRARNGAMAVAAHDIERRCAAVQAEN 95 6789************************************************9998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.1E-10 | 33 | 97 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.1E-7 | 34 | 117 | No hit | No description |
PROSITE profile | PS50217 | 9.691 | 35 | 98 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.9E-9 | 37 | 93 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.38E-8 | 37 | 79 | No hit | No description |
CDD | cd14702 | 2.17E-13 | 38 | 89 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 40 | 55 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence Send to blast |
MNMASPSVVS AATTSPLSGS DEAPGCDPQL VAVTAERKRK RKESNRLSAQ RSRARKQRQL 60 DDLTAQVAAL RARNGAMAVA AHDIERRCAA VQAENALLQA MNLELGERLQ SLTELIQCME 120 ATMYQYHQPQ LLDANMYNYY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 36 | 41 | RKRKRK |
2 | 36 | 42 | RKRKRKE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Do015291.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025818325.1 | 7e-74 | bZIP transcription factor 44-like | ||||
TrEMBL | A0A1E5VQF2 | 5e-97 | A0A1E5VQF2_9POAL; Uncharacterized protein | ||||
STRING | Si003289m | 9e-72 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13757 | 24 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 6e-14 | basic leucine-zipper 44 |