PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Do014545.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family | bZIP | ||||||||
Protein Properties | Length: 185aa MW: 19664.2 Da PI: 11.6193 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.6 | 3.1e-09 | 135 | 181 | 1 | 47 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 ek+ kr rr NRe+Ar +R++a +eL++kv+ L++eN++ kk Do014545.1 135 EKAAKRLRRVLANRESARQTILRRQAVRDELARKVADLSSENETIKK 181 799***************************************99885 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.6E-6 | 133 | 181 | No hit | No description |
Pfam | PF00170 | 1.1E-7 | 135 | 181 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.45E-5 | 139 | 181 | No hit | No description |
CDD | cd14702 | 1.98E-8 | 140 | 181 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MSDDQQRMRS GGGQRQCRRR GITPEVELGA ALALADMAGS SVGLGPAAER ATARAKVRPA 60 VVQLHTAAGA EEAMTDDDEM AGTRLSLQLG RVGIQSSSSS SAGRTSRQQP TTPAPAAAAT 120 GTQGPRPRHM LTEGEKAAKR LRRVLANRES ARQTILRRQA VRDELARKVA DLSSENETIK 180 KVSQI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Do014545.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025809461.1 | 1e-88 | light-inducible protein CPRF2-like | ||||
TrEMBL | A0A1E5V5I0 | 1e-125 | A0A1E5V5I0_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Cb02058.1.p | 3e-79 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3165 | 34 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19490.1 | 5e-10 | bZIP family protein |