PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do014385.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family WRKY
Protein Properties Length: 267aa    MW: 29976.6 Da    PI: 5.3836
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do014385.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY57.23.4e-18140184244
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSS CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaed 44 
                  Dg++WrKYGqK+++g ++prsYYrC+++  +C ++k ve+++ +
  Do014385.1 140 YDGHQWRKYGQKNINGRQHPRSYYRCAYRerNCLATKTVEQQKLN 184
                 59**************************999*********98643 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.0E-21125211IPR003657WRKY domain
SuperFamilySSF1182904.58E-18133211IPR003657WRKY domain
SMARTSM007744.0E-26139212IPR003657WRKY domain
PROSITE profilePS5081116.099141182IPR003657WRKY domain
PfamPF031062.6E-22141211IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MDCKRSSSLT LPPCGHGPEM MATMRRQQEL VMQLRALVLP LLHGVDEASA DIAVQLFDDV  60
IGCNISVASK LEGCLLMWST GAGGGPAVEL VDDKSLVVRM NTSTSTGDRT EEQAKPNRVG  120
QKRRRNDKRS RSLVTHVPHY DGHQWRKYGQ KNINGRQHPR SYYRCAYRER NCLATKTVEQ  180
QKLNEGTSSS AMASEEIAEY SVVYYGDHTC KDHSISTVEP PQLVNRDLQN VEMAQITTDA  240
QEAEADFDLP ALEVFDDSLV DWDDWNM
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo014385.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6696616e-41EU669661.1 Triticum aestivum WRKY31 gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004980128.11e-151probable WRKY transcription factor 26
TrEMBLA0A1E5W2K60.0A0A1E5W2K6_9POAL; Uncharacterized protein
STRINGSi027876m1e-142(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15881913
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.17e-13WRKY DNA-binding protein 55