PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do007861.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family EIL
Protein Properties Length: 474aa    MW: 50595.2 Da    PI: 5.395
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do007861.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN359.69.6e-19141267135257
                 -STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHH.....HT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTT CS
        EIN3 135 slselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwge.....lglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirele 228
                  l ++ D tl  +Lsa m +cdpp  + +   g +pPWWPt +e wwg+     lg  +++ + p+     lkk  kv+vL a +kh +p++ +    +
  Do007861.1 141 ALDKIRDETLRRMLSAVMLACDPPIEQRQSWIGAPPPWWPTASESWWGSelvayLGSMENHTPVPFAPAYKLKKLQKVAVLVAIVKHHAPDFHRFSGKV 239
                 578999*****************************************973333346556666999**9***********************99988766 PP

                 TTSSSSTT..T--SHHHHHHHHHHTTTTT-S CS
        EIN3 229 rqskylqd..kmsakesfallsvlnqeekec 257
                    k + d  k s  e+  + s +++e +  
  Do007861.1 240 ---KVMMDraKLSDWETKLWNSAIKNEAARW 267
                 ...4455556***************998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.3180.105.1E-32136268IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167689.94E-29139266IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048739.7E-19140263No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    Send to blast
MASMSSNLGT SSSTSARKLE EKRKQDATRG EEAKKQRHSH LNVTARPNGT AAVPVVPLHY  60
VASNAMAVTF PMAGVNGAAL RWSTAAALGA ASRAAALSLP VMAGGNGPAA PFLLVPALGL  120
EASPQLSCPP APAFVMPLAM ALDKIRDETL RRMLSAVMLA CDPPIEQRQS WIGAPPPWWP  180
TASESWWGSE LVAYLGSMEN HTPVPFAPAY KLKKLQKVAV LVAIVKHHAP DFHRFSGKVK  240
VMMDRAKLSD WETKLWNSAI KNEAARWKSA GPVPRTPVFL QILPQQPQPH GDGHRRQAPS  300
GTTPTEDAVP GGVGATEGCE QVVNPAGASV TTAADNGGQV VAAAEAEQPQ EQLNSGVLHG  360
GVVATDAGRE QPINLPGDDH QVPAEPELQP EHHGEMHLND TAAADMDQLL EDMLAPYQMQ  420
QGEEVHQVVD AEFPGAEAAV EAAPEGRPWY VNEDMSSIFD DFEMLVDIPH SCNH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A3e-1614027210137ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo007861.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1E5UUZ80.0A0A1E5UUZ8_9POAL; Uncharacterized protein
STRINGSi033190m2e-96(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15037818
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.11e-09EIL family protein