PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do006901.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 392aa    MW: 40864.4 Da    PI: 7.4832
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do006901.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.85.6e-09139191153
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                 eke kr rr   NRe+Ar    R++a  +eL++kv+ L+++N+++kk + + +
  Do006901.1 139 EKEAKRLRRVLANRESARQTIVRRQAIRDELARKVADLSSQNESMKKVARTTR 191
                 89********************************************8776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.0E-5137188No hitNo description
SMARTSM003384.6E-7139202IPR004827Basic-leucine zipper domain
PfamPF001705.0E-7139192IPR004827Basic-leucine zipper domain
CDDcd147021.86E-11144185No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MSDDSDGQRR CRRGVTVDVE LDAAMALADM AGVGPSPATA PGGADHHGRP AVHQPRAAAP  60
SHQPGATAED DEEEDLASTR LSLELGKVGI QSAASPCSSS SSAGHPPHPA YHQQQPQAPP  120
AAAATGYGPR PRHMLTEAEK EAKRLRRVLA NRESARQTIV RRQAIRDELA RKVADLSSQN  180
ESMKKVARTT RKAPAATPMH VTAAQHEAGE AMASPPATLP QPGFLYTAAP PAVPVPYVWG  240
SWPPAAAGYE HHHHQHHGSP PGPPPLCLPP PCAWCYPVVA DPRGSPSSAY PQPQQAAAFQ  300
QQQDPRGGAV AEPAGSGSPA GCGTAEEDTD DDTCSLTLGL DVADKRGAPA GGGAGPSDRV  360
KAATAAEARK RRKELTKLKH MHAGGRPGGE QW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1368373RKRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo006901.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025828038.11e-105uncharacterized protein LOC112903047
TrEMBLA0A1E5W7P60.0A0A1E5W7P6_9POAL; Uncharacterized protein
STRINGSi026452m1e-114(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.13e-09bZIP family protein