PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do004405.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 318aa    MW: 34505.6 Da    PI: 7.1115
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do004405.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.42.7e-07185227547
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                 kr +r   NR  A+r R RK+++i eLe+ v + ++e +aL  
  Do004405.1 185 KRVKRILANRQXAQRXRVRKLQYISELERSVTSXQTEVSALSP 227
                 8999***************************999999888875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-8181245IPR004827Basic-leucine zipper domain
PfamPF077161.0E-5183230IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.933183239IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-10185239No hitNo description
SuperFamilySSF579595.56E-9185239No hitNo description
CDDcd147036.20E-12186236No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MAQLPPKIPT MAPAWPEFGG GHHHHAHHHH QRSPSVGTFL AAPMPPHPPQ QHQNHHQQQQ  60
PSWVDEFLDF SAAKRGAHRR TVSDSVTFLE PGPDDGNAGV GAHDFDRLDD DQLLSMFSDD  120
LPPPPQQGAP APAPVASSSS PSDHNSINDE KTDGGGTEEA QSKCHGHAAV APGQPACAAA  180
AVDPKRVKRI LANRQXAQRX RVRKLQYISE LERSVTSXQT EVSALSPRVA FLDHQRSLLT  240
LGNSHLKQRI AALAQDKIFK DAHQEALRKE IERLRQIYHQ QSLKNAESPP APDAAPIRSD  300
KDLIASEGTA GAAPCPPS
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo004405.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269|PubMed:18065552}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004968609.11e-164basic leucine zipper 2
SwissprotQ5QNI51e-105BZP02_ORYSJ; Basic leucine zipper 2
TrEMBLA0A1E5WKV20.0A0A1E5WKV2_9POAL; Basic leucine zipper 2
STRINGPavir.J05339.1.p1e-169(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.12e-80bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]