PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Do004051.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family | bZIP | ||||||||
Protein Properties | Length: 150aa MW: 16944 Da PI: 8.5066 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.3 | 2.8e-12 | 51 | 106 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 + +r rr+ +NRe+ArrsR RK+ ++ eL v L + N++L + l++ ++ Do004051.1 51 DERRRRRMVSNRESARRSRMRKQRQLTELWAQVVHLRGTNRRLLDDLNRAMRGCSD 106 5679999***************************************9998877765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.6E-9 | 49 | 100 | No hit | No description |
SMART | SM00338 | 2.1E-13 | 49 | 113 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.864 | 51 | 102 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.14E-10 | 53 | 101 | No hit | No description |
Pfam | PF00170 | 1.5E-9 | 53 | 107 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 56 | 71 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 2.97E-13 | 58 | 102 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence Send to blast |
MIAMPPTPFH FSPSTFEPIH ETPAIIGNSP GGSGSADDAY AYGGRMAMAE DERRRRRMVS 60 NRESARRSRM RKQRQLTELW AQVVHLRGTN RRLLDDLNRA MRGCSDMCCE NAQLEKEKAE 120 LSTKLERLMQ AQNATTPSSS SEPRDDNSTE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 65 | 72 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Do004051.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KJ727709 | 1e-110 | KJ727709.1 Zea mays clone pUT5648 bZIP transcription factor (bZIP82) gene, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025799413.1 | 2e-91 | bZIP transcription factor 2-like | ||||
TrEMBL | A0A1E5WL02 | 1e-107 | A0A1E5WL02_9POAL; Uncharacterized protein | ||||
STRING | Si031238m | 1e-85 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 5e-12 | basic leucine-zipper 42 |