PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV58542.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

bZIP

Protein Properties

Length: 312aa MW: 35376.1 Da PI: 9.9028

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV58542.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.3	1e-10	24	68	3	47
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 e+k+ rr+++NReAA++sR RKka++++Le+ ++L++ ++Lk KZV58542.1 24 EIKALRRLAQNREAAKKSRIRKKAYVQQLENSRQKLTQLEQELKR 68 6899********************************999998874 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.1E-5	22	80	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.2E-8	23	69	No hit	No description
PROSITE profile	PS50217	9.312	24	68	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.9E-8	24	68	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.13E-6	26	71	No hit	No description
PROSITE pattern	PS00036	0	29	44	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	5.2E-29	111	183	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009909	Biological Process	regulation of flower development
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence Send to blast
FPGGRNERLT TLDSRDPPDG KTGEIKALRR LAQNREAAKK SRIRKKAYVQ QLENSRQKLT 60 QLEQELKRAR QQSMLVPSGA TGDHSHSISG NGALAFDMEY ARWREEHQGL IEDLRSAVNS 120 HVGDSELRLI VDAVMSHYDE VFRLKSVGAK SDVFHILSGM WKAPTERCFM WLGGFRSSEV 180 LKIPERQIEP LTEQQVMGIR SLQQSSQQAE DALSQGMEAL QQSLVDTLSS ISSTPRGSGY 240 VSDYMEQMSM AMSKLSALEN FLHQADLLRQ QTLQQLQRIL TTRQAARAFL AINDYKSRLR 300 ALSSLWWARP KE

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV58542.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011077152.1	1e-173	transcription factor HBP-1b(c38)-like
Swissprot	P23923	1e-146	HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBL	A0A2Z7DH89	0.0	A0A2Z7DH89_9LAMI; Uncharacterized protein (Fragment)
STRING	VIT_01s0011g03230.t01	1e-167	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA820	23	85

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68640.1	1e-139	bZIP family protein

Publications ? help Back to Top
Tabata T,Nakayama T,Mikami K,Iwabuchi M HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat. EMBO J., 1991. 10(6): p. 1459-67 [PMID:2026143]