PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV57555.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | VOZ | ||||||||
Protein Properties | Length: 454aa MW: 50525.4 Da PI: 5.0416 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 422 | 9.4e-130 | 173 | 392 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelf 96 pppsaflgpkcalwdc+rpaqgs+w+q dycs++ha la +eg +g pv+rp+gi+lkd+llfaal +k+qgk+vgipecegaatakspwna+elf KZV57555.1 173 PPPSAFLGPKCALWDCPRPAQGSDWCQtsdDYCSAYHAGLAPDEGYLGRPPVVRPGGIGLKDNLLFAALGTKAQGKDVGIPECEGAATAKSPWNAPELF 271 89***********************976669******************************************************************** PP VOZ 97 dlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekks 195 dl +l+getirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyein++d++alyrle+k vd+kks KZV57555.1 272 DLIVLDGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEFGGLKRSYYMDPQPMENFEWHLYEYEINKYDSCALYRLEVKRVDGKKS 370 *************************************************************************************************** PP VOZ 196 akgkvskdsladlqkklgrlta 217 +kgk+s+ds+adlqk++grl+a KZV57555.1 371 PKGKLSNDSVADLQKQMGRLSA 392 ********************97 PP |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009408 | Biological Process | response to heat | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009631 | Biological Process | cold acclimation | ||||
GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048578 | Biological Process | positive regulation of long-day photoperiodism, flowering | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 454 aa Download sequence Send to blast |
MFSDLQSARK DSRTIDVNLL EEQVHQMLRE WKAELNEPSP ASSLQQGGSL GSFSSEICRL 60 LQLCEEEDDA TSALAVPKPD PEGQKVVEES TTQEGFNVPS GHQAQALHFV DQCKSSGIGV 120 NQIATHNINL ADFQSLIFHP ELEHHFFPGF NGHCFIGEDG TPQISGYQQT ICPPPSAFLG 180 PKCALWDCPR PAQGSDWCQT SDDYCSAYHA GLAPDEGYLG RPPVVRPGGI GLKDNLLFAA 240 LGTKAQGKDV GIPECEGAAT AKSPWNAPEL FDLIVLDGET IREWLFFDKP RRAFESGNRK 300 QRSLPDYNGR GWHESRKQVM NEFGGLKRSY YMDPQPMENF EWHLYEYEIN KYDSCALYRL 360 EVKRVDGKKS PKGKLSNDSV ADLQKQMGRL SAEFPNPNEK QRMVKGRGKA CVKDGTGSIY 420 SASNQLSSPV EVLDYSKGSP YDYLVDNMNG YYLT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV57555.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011096373.2 | 0.0 | transcription factor VOZ1, partial | ||||
Swissprot | Q9SGQ0 | 0.0 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A4D8ZHY0 | 0.0 | A0A4D8ZHY0_SALSN; Uncharacterized protein | ||||
STRING | Migut.M01093.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2818 | 24 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 0.0 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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