PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV57220.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | TCP | ||||||||
Protein Properties | Length: 358aa MW: 38107.8 Da PI: 6.5304 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 118.3 | 9.6e-37 | 92 | 203 | 2 | 112 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..kaaksaaks 97 a+ k++++++hTkv+gR+RR+R++a +aar+F+L++eLG+++d++ti WLl+ a+pai+e+tgt++++a ++ +++ + + s+ + a++++k+ KZV57220.1 92 APPKRSSKDRHTKVEGRGRRIRMPAAVAARIFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTIPAIAVsVNGTLKIPTT--PSPaaADAPESPKK 188 7889****************************************************************965532222222222..22222333333344 PP TCP 98 kksqksaasalnlak 112 +++++s++++ ++++ KZV57220.1 189 RRKRASNSEFCDVNH 203 444444444444444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03634 | 1.9E-29 | 97 | 174 | IPR005333 | Transcription factor, TCP |
PROSITE profile | PS51369 | 26.955 | 98 | 152 | IPR017887 | Transcription factor TCP subgroup |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0031347 | Biological Process | regulation of defense response |
Sequence ? help Back to Top |
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Protein Sequence Length: 358 aa Download sequence Send to blast |
MASIFRHHLR RENLEPQEEH DVTTLSSDPL QRNGYTITAL DTAEADPSPP RDSEIPTLLK 60 DEPADTDLTG DLSVGWTASP PKEVKTVVSA AAPPKRSSKD RHTKVEGRGR RIRMPAAVAA 120 RIFQLTRELG HKSDGETIRW LLERAEPAII EATGTGTIPA IAVSVNGTLK IPTTPSPAAA 180 DAPESPKKRR KRASNSEFCD VNHSSNFAPV APIAPQGLVP VFPTGTFFMI PPTGPAASAV 240 PPIQPQFWAI PATATPVFNV SARPIQNFMT FGAPTGDTTS ATSYGGGESL AEPENSIKGG 300 VKEPATAMSP STANTANGTK GGTQILRDFS LEIYDKKELQ FMVGSDSSNL EQNPSSKP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 186 | 190 | KKRRK |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00667 | PBM | Transfer from GSVIVG01027588001 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV57220.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076261.1 | 1e-132 | transcription factor TCP19 | ||||
Swissprot | Q9LT89 | 4e-69 | TCP19_ARATH; Transcription factor TCP19 | ||||
TrEMBL | A0A2Z7BA00 | 0.0 | A0A2Z7BA00_9LAMI; Uncharacterized protein | ||||
STRING | Migut.F00395.1.p | 1e-130 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA248 | 24 | 201 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51910.2 | 2e-67 | TCP family protein |