PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV56196.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family MYB
Protein Properties Length: 288aa    MW: 32131.5 Da    PI: 9.7917
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV56196.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding62.96.5e-201257147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEdell  +v+++G+++W++I++ ++ gR++k+c++rw + 
       KZV56196.1 12 KGPWSQEEDELLQSLVEKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57
                     79******************************.***********985 PP
2Myb_DNA-binding56.37.3e-1866108347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+eEde +++a++++G++ W+tIar +  gRt++ +k++w++ 
       KZV56196.1  66 PFTAEEDETILRAHTKFGNK-WATIARLLS-GRTDNAIKNHWNST 108
                      89******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129427.125762IPR017930Myb domain
SuperFamilySSF466893.13E-329105IPR009057Homeodomain-like
SMARTSM007171.2E-171160IPR001005SANT/Myb domain
PfamPF002491.8E-191257IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.6E-271365IPR009057Homeodomain-like
CDDcd001675.33E-171456No hitNo description
SMARTSM007171.7E-1463111IPR001005SANT/Myb domain
PROSITE profilePS5129421.05764113IPR017930Myb domain
CDDcd001676.38E-1266109No hitNo description
PfamPF002494.8E-1466108IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.6E-2366112IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MAQRSKESDR IKGPWSQEED ELLQSLVEKH GPRNWSLISK SIPGRSGKSC RLRWCNQLSP  60
QVEHRPFTAE EDETILRAHT KFGNKWATIA RLLSGRTDNA IKNHWNSTLK RKCQSMTSEE  120
FNSFDPEAQQ PLKRSASVGS EFCFNPGSPS GSDASDSGLH VYRPIARTGG FSPPDLITSL  180
TLSPPGSSVT EKPVPNPIPV KEPGVKPQPT RPIQMIQSHP PPPLPQPRQA APVREQQFFN  240
PEFLSVMQEL VRTEVRNYMA GFEKSVFCVP SEAIKNAVVK RIGISKID
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A3e-40111133105MYB PROTO-ONCOGENE PROTEIN
1mse_C3e-40111133105C-Myb DNA-Binding Domain
1msf_C3e-40111133105C-Myb DNA-Binding Domain
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV56196.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851720.11e-138PREDICTED: transcription factor MYB44-like
SwissprotO231608e-84MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A2Z7DAT40.0A0A2Z7DAT4_9LAMI; Uncharacterized protein
STRINGMigut.C00524.1.p1e-137(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15862471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.14e-77myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]