PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV55312.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 392aa    MW: 44305.8 Da    PI: 5.1414
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV55312.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.52.2e-52201471128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 l+pGfrFhPtdeelv +yL++k+ gk++++ +++ e+d+yk+ePw+L   +++k++++ewyfFs+ d+ky +g+r nrat +gyWkatgkd++v + k+
  KZV55312.1  20 LAPGFRFHPTDEELVRYYLRRKACGKPFRF-QAVIEIDVYKSEPWELAeySSLKTRDQEWYFFSPVDRKYGNGSRLNRATGKGYWKATGKDRPVRH-KN 116
                 579**************************9.77999***********84347888999**************************************.89 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 +++g+kktLvf++grap+g++t+Wvmheyrl
  KZV55312.1 117 QAIGMKKTLVFHSGRAPDGKRTNWVMHEYRL 147
                 99***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-6116170IPR003441NAC domain
PROSITE profilePS5100557.85620170IPR003441NAC domain
PfamPF023654.1E-2822147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MVQEGVVAAG KGAAPPPTSL APGFRFHPTD EELVRYYLRR KACGKPFRFQ AVIEIDVYKS  60
EPWELAEYSS LKTRDQEWYF FSPVDRKYGN GSRLNRATGK GYWKATGKDR PVRHKNQAIG  120
MKKTLVFHSG RAPDGKRTNW VMHEYRLCDM ELERAGVTQD AFVLCRIFQK SGLGPPNGDR  180
YAPFVEEEWD DDAMLVVPGG DADDDVPNGD EVRVECTDLG QDPTPLIMAP TQIENPVESQ  240
SLNFLCKREK SEDPRELSLS QSKRSKHNDP NSSNANGSED STTMTQDPPT MIMTTNFPLG  300
PFEFPLLEPI ERQENRSVIN PLDSSNLEKS VPPGYLKFIS NLENEILNVS MERETLKIEV  360
MRAQAMINIL QSQVDSLTKD NDDLRRAVSR RG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-511917016165NO APICAL MERISTEM PROTEIN
1ut4_B1e-511917016165NO APICAL MERISTEM PROTEIN
1ut7_A1e-511917016165NO APICAL MERISTEM PROTEIN
1ut7_B1e-511917016165NO APICAL MERISTEM PROTEIN
3swm_A1e-511917019168NAC domain-containing protein 19
3swm_B1e-511917019168NAC domain-containing protein 19
3swm_C1e-511917019168NAC domain-containing protein 19
3swm_D1e-511917019168NAC domain-containing protein 19
3swp_A1e-511917019168NAC domain-containing protein 19
3swp_B1e-511917019168NAC domain-containing protein 19
3swp_C1e-511917019168NAC domain-containing protein 19
3swp_D1e-511917019168NAC domain-containing protein 19
4dul_A1e-511917016165NAC domain-containing protein 19
4dul_B1e-511917016165NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV55312.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101542.10.0NAC domain-containing protein 78 isoform X2
TrEMBLA0A2Z7D6P70.0A0A2Z7D6P7_9LAMI; NAC domain-containing protein 78-like
STRINGXP_009780872.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31402448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.23e-96NAC domain containing protein 50