PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV55311.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 595aa    MW: 66245.2 Da    PI: 4.7715
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV55311.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.62.1e-52171441128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 l+pGfrFhPtdeelv +yL++kv gk++ + ++i+++diyk+ePwdLp  +k+k+++ ewyfF   d+ky +g+r+nratk+gyWk+tgkd++v++ k 
  KZV55311.1  17 LAPGFRFHPTDEELVRYYLRRKVCGKSFLM-DAISDIDIYKAEPWDLPcmSKLKTRDLEWYFFGMLDRKYGNGSRTNRATKKGYWKTTGKDRAVYH-KA 113
                 579************************999.89***************6347777888**************************************.99 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                   vg+kktLv+++grap+g++++Wvmheyrl
  KZV55311.1 114 VIVGMKKTLVYHNGRAPNGQRSNWVMHEYRL 144
                 99***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.32E-5714154IPR003441NAC domain
PROSITE profilePS5100554.66917203IPR003441NAC domain
PfamPF023651.6E-2719144IPR003441NAC domain
SuperFamilySSF1019414.32E-57191203IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    Send to blast
MESTSKKKKS SSSSTLLAPG FRFHPTDEEL VRYYLRRKVC GKSFLMDAIS DIDIYKAEPW  60
DLPCMSKLKT RDLEWYFFGM LDRKYGNGSR TNRATKKGYW KTTGKDRAVY HKAVIVGMKK  120
TLVYHNGRAP NGQRSNWVMH EYRLTDLELE RAGISQISGV VDARVSRYHS YKNMSAPMPS  180
REARFCAQAQ AEDAFVLCRV FQKSGSGPRN GEQYGAPLVE EEWEDEELES VLQKEFSEEV  240
DFGDDFCLDG HDLEQILGST ASSFITTPQL NFQSADGSHG VETTTSVSDT EKLLVGAGEQ  300
TCQQESFNGT SLCDLFVPSD VNLNLVKHDY IGESCKSGNP EDTDFLLDEL FLDSSEYFPF  360
GEGGFIESSD LLNPVEANTT DIDMLEEYLT FFDARDDSSQ NFAYDPSIIP SEDLVSAQSF  420
RPLKELNEGT EQGVILGGQI TDCSNLFAAS SSHKRMVAKY QSDPPSPFIK KASRMLSDVP  480
TKPAFASEFP SKDSNLFNFA HPSSSPVHLT AGMVQIQNLA VGTNAMIHPF KHENLDITVA  540
FGLSRGDDGS ANLQSSISIQ PGKILSAISR DWFYMCLRVL VLSTSFVMGL YLCAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-4461444140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV55311.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076897.10.0NAC domain-containing protein 53 isoform X1
TrEMBLA0A2Z7DE270.0A0A2Z7DE27_9LAMI; NAC domain-containing protein 78-like
STRINGMigut.F01913.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31412450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-108NAC domain containing protein 2