PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV53715.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

NAC

Protein Properties

Length: 274aa MW: 30945.5 Da PI: 4.4606

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV53715.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	75.8	1e-23	17	90	2	74
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrk 74 ppGfrF+Ptdeelv +yLk+k+ +k+ l +vi+e+d+yk++P++Lp +k+k+++++w+fFs+rd+ky++ + + KZV53715.1 17 PPGFRFQPTDEELVLFYLKRKICKKRYGL-DVIAETDVYKWDPEELPglSKLKTGDRQWFFFSPRDRKYPNAQDP 90 9***********************999.99***********6559999**************97754 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	5.23E-26	9	90	IPR003441	NAC domain
PROSITE profile	PS51005	20.749	16	178	IPR003441	NAC domain
Pfam	PF02365	3.3E-11	17	83	IPR003441	NAC domain
PROSITE pattern	PS00018	0	152	164	IPR018247	EF-Hand 1, calcium-binding site

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence Send to blast
MTSDSGSDCF WNGQRFPPGF RFQPTDEELV LFYLKRKICK KRYGLDVIAE TDVYKWDPEE 60 LPGLSKLKTG DRQWFFFSPR DRKYPNAQDP AEQQCMDIGK PLARTVSSLV DLVLLSQPQK 120 VLAFDGLEKL HVDGLSEFDF FLDAPLSVPE FDTDESGQIT HEDLNGYENG VTNPISSYYV 180 QNNENGMALV HQNRSNNSDT RFPGLYETGS NKQDNGTDSW FSSALWSFVE SIPTTPASAS 240 DSTLAVMGYC CNRRSEVITA SRNELINRII PCTI

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	4e-20	16	90	17	89	NO APICAL MERISTEM PROTEIN
1ut4_B	4e-20	16	90	17	89	NO APICAL MERISTEM PROTEIN
1ut7_A	4e-20	16	90	17	89	NO APICAL MERISTEM PROTEIN
1ut7_B	4e-20	16	90	17	89	NO APICAL MERISTEM PROTEIN
3swm_A	5e-20	16	90	20	92	NAC domain-containing protein 19
3swm_B	5e-20	16	90	20	92	NAC domain-containing protein 19
3swm_C	5e-20	16	90	20	92	NAC domain-containing protein 19
3swm_D	5e-20	16	90	20	92	NAC domain-containing protein 19
3swp_A	5e-20	16	90	20	92	NAC domain-containing protein 19
3swp_B	5e-20	16	90	20	92	NAC domain-containing protein 19
3swp_C	5e-20	16	90	20	92	NAC domain-containing protein 19
3swp_D	5e-20	16	90	20	92	NAC domain-containing protein 19
4dul_A	4e-20	16	90	17	89	NAC domain-containing protein 19
4dul_B	4e-20	16	90	17	89	NAC domain-containing protein 19

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV53715.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011074131.1	4e-42	NAC domain-containing protein 17-like
TrEMBL	A0A2Z7D386	0.0	A0A2Z7D386_9LAMI; Uncharacterized protein
STRING	Migut.N02932.1.p	1e-37	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3212	24	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	3e-35	NAC domain containing protein 17