PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV53292.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | ERF | ||||||||
Protein Properties | Length: 174aa MW: 19778.8 Da PI: 9.9643 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 21.6 | 5.3e-07 | 120 | 149 | 1 | 37 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfg 37 ++y+GVr+++ +g+++AeIr+ p + ++g+ KZV53292.1 120 THYRGVRQRP-WGKFAAEIREtPES-------RVGRRR 149 68********.**********7733.......233444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 9.954 | 121 | 163 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.6E-7 | 121 | 142 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence Send to blast |
MANPDEVSAI EYIRMHLLGE YSPAPLSFSD DLYSNTNLFS SSGSSCDDHY SAGYTLDNFS 60 SSGESLTLER SQSNGPPMID LTTPRIKNKK PSLNVELPET NGFEWVIEFS GSNQCQSSST 120 HYRGVRQRPW GKFAAEIRET PESRVGRRRT RQQARRRRRR NLGDNRRGSS VRLR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 150 | 159 | RQQARRRRRR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV53292.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022866990.1 | 1e-29 | ethylene-responsive transcription factor ERF104-like | ||||
TrEMBL | A0A2Z7D1D4 | 1e-125 | A0A2Z7D1D4_9LAMI; Ethylene-responsive transcription factor 5-like | ||||
STRING | Migut.A01161.1.p | 6e-25 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17490.1 | 9e-14 | ethylene responsive element binding factor 6 |