PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV53250.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family GeBP
Protein Properties Length: 393aa    MW: 43868.1 Da    PI: 8.6113
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV53250.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573114.56.5e-36173269298
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                 lfqrlwse+Deiv+L G+ ++++k+ ++p++d++af +f+kk+++++v++ ql +KirrLK+K++++++k k+gk+++f+k+h+qk++elsk +Wgs
  KZV53250.1 173 LFQRLWSEDDEIVILEGMAEYAEKKRSDPVADLSAFLDFIKKNLHVDVTRVQLQDKIRRLKRKYENNKNKEKEGKDKTFTKPHEQKAYELSKVLWGS 269
                 79*********************************************************************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.0E-32174268IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MAKSREPEKP VEYQTDSGEE EDEASSEEVG SSDSDSEPEQ GKSQFLKKPV PAPAAPKKLQ  60
PQTVSNPQQP ASSSDDEESG SESESEGPKP QVKPLASRPM DSPQKSAPAG KLRSKPNATV  120
SSTPTKSAGA KRPAEEKEVE AKENKKSKKK PEPQPESSVK KSPLTGDDSK KQLFQRLWSE  180
DDEIVILEGM AEYAEKKRSD PVADLSAFLD FIKKNLHVDV TRVQLQDKIR RLKRKYENNK  240
NKEKEGKDKT FTKPHEQKAY ELSKVLWGSD KGKETGVEKV LGSPKANGSP ARKNLSKMVN  300
VVEDGHSKEV KNLENENDEL VIWGSKRLIA HSESVEERIL RAGAEFFEGD KKLEGAREWK  360
KLRQEEVEIQ LKKLDVLRAQ TKLVLDALKS SYQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV53250.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022873533.11e-131probable transcription factor At1g11510
TrEMBLA0A2Z7D2M70.0A0A2Z7D2M7_9LAMI; Mediator-associated protein 1
STRINGMigut.M01263.1.p2e-85(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30421947
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.16e-18DNA-binding storekeeper protein-related transcriptional regulator