PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV53223.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | VOZ | ||||||||
Protein Properties | Length: 448aa MW: 50571.3 Da PI: 5.1903 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 405 | 1.5e-124 | 209 | 428 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelf 96 pppsaflgpkcalwdc+rpa s+w q dycs++h++la eg +g pv+rp+gi+lkd+llfaals+++qgk+vgipecegaatakspwna+elf KZV53223.1 209 PPPSAFLGPKCALWDCPRPALASDWSQksdDYCSTYHTQLAPAEGYLGRPPVVRPGGIGLKDNLLFAALSSRAQGKDVGIPECEGAATAKSPWNAPELF 307 89*********************99865559******************************************************************** PP VOZ 97 dlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekks 195 dl +l+getirewlffdkprrafesg+rkqrslpdy+grgwhesrkq++kef+glkrsyymdpqp+++fewhlyeyeine+da++lyrlelk +d+kks KZV53223.1 308 DLIVLDGETIREWLFFDKPRRAFESGSRKQRSLPDYNGRGWHESRKQLVKEFNGLKRSYYMDPQPMENFEWHLYEYEINEYDACTLYRLELKRADGKKS 406 *************************************************************************************************** PP VOZ 196 akgkvskdsladlqkklgrlta 217 +kgk+ +ds+adlqk++grlta KZV53223.1 407 PKGKLGNDSVADLQKQMGRLTA 428 ********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 448 aa Download sequence Send to blast |
MGKGSKSGAG KSASHQLLKD RAKNRVDDLQ GMLSNLQSAR KESRTVDVNL LEEQVHQMLR 60 EWKAELNEPS PASSLQQDGS LGSFSSEICR LLQLREEEDD ATSTLAAPKL EPEPDTQKVE 120 TESTSQEGFE VSEGVQEQCL QLVDQSRSSG MVVHHNGMNH MDLTEQLGYH SFDFHPELNE 180 QWFPSCSGTF FMGEDGTPQI HDYQQNITPP PSAFLGPKCA LWDCPRPALA SDWSQKSDDY 240 CSTYHTQLAP AEGYLGRPPV VRPGGIGLKD NLLFAALSSR AQGKDVGIPE CEGAATAKSP 300 WNAPELFDLI VLDGETIREW LFFDKPRRAF ESGSRKQRSL PDYNGRGWHE SRKQLVKEFN 360 GLKRSYYMDP QPMENFEWHL YEYEINEYDA CTLYRLELKR ADGKKSPKGK LGNDSVADLQ 420 KQMGRLTAEF PNEKQRSVKE RRKSKDET |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV53223.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011086027.1 | 0.0 | transcription factor VOZ1-like isoform X1 | ||||
Refseq | XP_011086028.1 | 0.0 | transcription factor VOZ1-like isoform X1 | ||||
Refseq | XP_020551529.1 | 0.0 | transcription factor VOZ1-like isoform X1 | ||||
Swissprot | Q9SGQ0 | 0.0 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A2Z7D1I7 | 0.0 | A0A2Z7D1I7_9LAMI; Uncharacterized protein | ||||
STRING | Migut.M01093.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2818 | 24 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 0.0 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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