PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV48671.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

TCP

Protein Properties

Length: 355aa MW: 37611.3 Da PI: 6.0296

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV48671.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	87.5	3e-27	1	108	24	111
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....................kaaksaakskksq 101 ++a caar+F+L++eLG+++d++tieWLlqqa+pai ++tgt++++a+++ + s +ss+s+ s++ +++ s++ + + q KZV48671.1 1 MPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAILAATGTGTIPANFStLNISLRSSGSTLSAPpsksmphsfhsalglahhpyEENFSQMLGFHHQ 99 9**********************************************9998888888888855555666677777777777777743333333333333 PP TCP 102 ksaasalnla 111 ++++ +l la KZV48671.1 100 QQSS-NLLLA 108 3333.33333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51369	21.024	1	39	IPR017887	Transcription factor TCP subgroup
Pfam	PF03634	8.6E-27	1	118	IPR005333	Transcription factor, TCP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence Send to blast
MPAACAARVF QLTRELGHKS DGETIEWLLQ QAEPAILAAT GTGTIPANFS TLNISLRSSG 60 STLSAPPSKS MPHSFHSALG LAHHPYEENF SQMLGFHHQQ QSSNLLLAAP NSESVAGESG 120 DGGGGQQATE NYLQKRYRED LFKEGAIDSH GEGPSSPPLK QFKSKNNSQV IQVQKTQEAE 180 VAPGNSPGNI IRHANMMPTT AMWAVAPSQS SGTTGSTFWM LPVTASAGGG DGSRHPTSSS 240 PPTASGSPSE TAQIWPFPTA HGVGNSLQTP LHFMPRYNYS GNLEFQGGRS NPLQLGSMLQ 300 PSQHLGLGVS AESNLGMLAA LNSFSRNNLN MNSENLEQNQ TQTTDSGDDE QNSSQ

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence Send to blast

MPAACAARVF QLTRELGHKS DGETIEWLLQ QAEPAILAAT GTGTIPANFS TLNISLRSSG  60
STLSAPPSKS MPHSFHSALG LAHHPYEENF SQMLGFHHQQ QSSNLLLAAP NSESVAGESG  120
DGGGGQQATE NYLQKRYRED LFKEGAIDSH GEGPSSPPLK QFKSKNNSQV IQVQKTQEAE  180
VAPGNSPGNI IRHANMMPTT AMWAVAPSQS SGTTGSTFWM LPVTASAGGG DGSRHPTSSS  240
PPTASGSPSE TAQIWPFPTA HGVGNSLQTP LHFMPRYNYS GNLEFQGGRS NPLQLGSMLQ  300
PSQHLGLGVS AESNLGMLAA LNSFSRNNLN MNSENLEQNQ TQTTDSGDDE QNSSQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV48671.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011087706.1	1e-150	transcription factor TCP8
TrEMBL	A0A2Z7CNK4	0.0	A0A2Z7CNK4_9LAMI; Uncharacterized protein
STRING	Migut.B00803.1.p	1e-131	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA11484	21	25

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	8e-63	TCP family protein