PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV48531.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | ARR-B | ||||||||
Protein Properties | Length: 442aa MW: 49281.2 Da PI: 5.1155 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 65.6 | 9.1e-21 | 209 | 258 | 5 | 55 |
G2-like 5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +Wt+eLHe+Fve+v++L G + P+ ile+m+v+gLt+ +v+SHLQk R KZV48531.1 209 EWTQELHEKFVEVVKEL-GDGRCFPRDILEAMNVPGLTRMQVASHLQKCRQ 258 7****************.9*****************************995 PP | |||||||
2 | Response_reg | 25.1 | 9.1e-10 | 26 | 118 | 14 | 107 |
HHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHH CS Response_reg 14 lrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeel 107 r++le y ev++++ + a ll +++ +D++++D++ ++++G++l+ + + +i+++++ ++++++ a++ Ga f+ Kp +e l KZV48531.1 26 TRKLLEFNSY-EVTAVSVAAVASSLLAKEKgkYDVVMVDVSPSDVQGFQLAHDAINLG--YTVILMSDNPNPTLVKCAIEDGAFMFIQKPATMEVL 118 5778887888.888888888888888666667*******************9876655..89****************************777655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.40.50.2300 | 1.9E-15 | 11 | 140 | No hit | No description |
PROSITE profile | PS50110 | 19.141 | 12 | 126 | IPR001789 | Signal transduction response regulator, receiver domain |
SuperFamily | SSF52172 | 1.34E-13 | 12 | 163 | IPR011006 | CheY-like superfamily |
Pfam | PF00072 | 2.5E-6 | 25 | 118 | IPR001789 | Signal transduction response regulator, receiver domain |
PROSITE profile | PS51294 | 12.46 | 202 | 261 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.9E-19 | 205 | 259 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 4.66E-14 | 209 | 261 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 7.1E-8 | 209 | 256 | IPR001005 | SANT/Myb domain |
TIGRFAMs | TIGR01557 | 1.2E-17 | 209 | 258 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 442 aa Download sequence Send to blast |
MAFFHANMIE VHVLLFGNDM VSLLDTRKLL EFNSYEVTAV SVAAVASSLL AKEKGKYDVV 60 MVDVSPSDVQ GFQLAHDAIN LGYTVILMSD NPNPTLVKCA IEDGAFMFIQ KPATMEVLKY 120 LWQHVLRENT RKSKESARFR EMVSTIESSN FILNSGQNMI HPSTIEANVN LHEFGSRNVV 180 HRNGLEGFMF GPEDENLEYR GKKPKICTEW TQELHEKFVE VVKELGDGRC FPRDILEAMN 240 VPGLTRMQVA SHLQKCRQGL KAAHEEGQQN GSSVSSTSNG PNYHSKPKRR GSYPRIAKGA 300 QPKFLVRNKE KDEQAATTKP VEDSIGSVEP ENMKQNIVIS DNASNKSVNV TGISCGHTNG 360 EVVVESNHEG WTIPFDDSFD FAIDNSYGIN VMDYNFEGFG VDQTFSQAGV DQTFSQLISS 420 ASDEEPGSFW RSFFSNFSSE QD |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV48531.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2Z7CN60 | 0.0 | A0A2Z7CN60_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA813 | 23 | 84 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.2 | 6e-23 | response regulator 1 |