PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV47502.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HSF
Protein Properties Length: 314aa    MW: 36289.5 Da    PI: 4.7127
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV47502.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind93.62.2e-29131042102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl k++ei +d+e+++++sw+++g+sf+++d+++f++++LpkyFk + f+SFv QLn YgF+k+  e           e+++++F++gkke l++ik
    KZV47502.1  13 FLLKIFEIADDPETDSIVSWNSSGTSFIIWDHNKFSESILPKYFKSNVFSSFVYQLNNYGFRKICCEI---------YEYANPWFQAGKKEWLKNIK 100
                   9**************************************************************98765.........89****************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k+
    KZV47502.1 101 RRKE 104
                   **97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.101.9E-29497IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004151.0E-399102IPR000232Heat shock factor (HSF)-type, DNA-binding
SuperFamilySSF467854.72E-289102IPR011991Winged helix-turn-helix DNA-binding domain
PRINTSPR000563.4E-151336IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004474.7E-2613102IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.4E-155163IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.4E-156476IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MEESHEEHAL PPFLLKIFEI ADDPETDSIV SWNSSGTSFI IWDHNKFSES ILPKYFKSNV  60
FSSFVYQLNN YGFRKICCEI YEYANPWFQA GKKEWLKNIK RRKEKFQVPK KRGRSTLKYD  120
SMNAAADQEL QALMTEQNNM KEQIKKLKER IGKMEHQIIS IKSKMSFHEL SDYEGGVTDF  180
SKQMHLEEIQ DHASENGAKR PRLTELEITE SEVNNEDIVE IFTAKVSSAD NSGSGNSIQS  240
SKENTESFDF LKRILEDDTW FSTEGEGNLP VDHSKAIVEL ARMMESYTTM DRGNLEEKAS  300
DQEMDDDVPT DLRA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ldu_A1e-211010217120Heat shock factor protein 1
5d5u_B1e-211010226129Heat shock factor protein 1
5d5v_B1e-211010226129Heat shock factor protein 1
5d5v_D1e-211010226129Heat shock factor protein 1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195101LKNIKRR
2108114PKKRGRS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV47502.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101442.13e-86heat stress transcription factor A-7a-like isoform X1
RefseqXP_011101443.12e-86heat stress transcription factor A-7a-like isoform X2
TrEMBLA0A2Z7CK860.0A0A2Z7CK86_9LAMI; Heat stress transcription factor A-2-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA129701518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51910.11e-38heat shock transcription factor A7A