PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV45352.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 594aa    MW: 67101.2 Da    PI: 6.7582
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV45352.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.52.2e-5271431128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 
                 lp+GfrF+Ptdeelv++yL+ k++g++  +  vi+evd++k+ePwdLp+   +k++++ew+fF++rd+ky++g+r+nrat++gyWkatgkd++++s+  
  KZV45352.1   7 LPKGFRFRPTDEELVNHYLRLKINGHHSAV-GVIPEVDVCKWEPWDLPAlsVIKSDDQEWFFFCPRDRKYPNGHRSNRATEAGYWKATGKDRTIKSRks 104
                 799************************888.99***************4458889999**************************************967 PP

         NAM  96 ......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + +++g+kktLvf++grapkge+t+W+mheyr+
  KZV45352.1 105 spsypvNANVIGTKKTLVFHRGRAPKGERTNWIMHEYRA 143
                 7766666666***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.75E-613166IPR003441NAC domain
PROSITE profilePS5100558.097166IPR003441NAC domain
PfamPF023652.9E-278142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0071470Biological Processcellular response to osmotic stress
GO:1900426Biological Processpositive regulation of defense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
Sequence ? help Back to Top
Protein Sequence    Length: 594 aa     Download sequence    Send to blast
MMKLEALPKG FRFRPTDEEL VNHYLRLKIN GHHSAVGVIP EVDVCKWEPW DLPALSVIKS  60
DDQEWFFFCP RDRKYPNGHR SNRATEAGYW KATGKDRTIK SRKSSPSYPV NANVIGTKKT  120
LVFHRGRAPK GERTNWIMHE YRATEPDLDG TGPGQEDYVL CRLFHKADEK LDDFKYDEVE  180
PTRSSPSTNI SSPDEVSSDI FQEPKVQAVH VLNELEGVKK WEDVKKREDE VDYRTPTLAP  240
VLSCASHGST HSKEGTATKV YESSRLMSKE VKCNPLDNKG VDPLQSFICN DLGNCIGSPF  300
ADDFGNDHNG LHFQDGTYEQ DASLSELLAV LQKNEDYLCK ESASYGHSAA TRENLLPWHT  360
DNLDLTGTAS CKVIDYDPYG ETDKMMVQAQ DDPAYYSSYR YAAEENDPLF NKVKDCQQLD  420
NSSFQTLQVK ASSSSYTGSG IKIQSRHPRN QPSSMKYGVQ GIASRRIRLS IRRGLNSAHY  480
EKSNEASNIE EQESVSLVTE AAPDISLHPW ELEGKITSEN KVSALTCNRR LKLQVKHAEK  540
IGCSKIASFM RSMVLSTRRN ACYLNLYASS IYLVLFLLIV SIAIWKSPSF HEVH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A5e-46616619168NAC domain-containing protein 19
3swm_B5e-46616619168NAC domain-containing protein 19
3swm_C5e-46616619168NAC domain-containing protein 19
3swm_D5e-46616619168NAC domain-containing protein 19
3swp_A5e-46616619168NAC domain-containing protein 19
3swp_B5e-46616619168NAC domain-containing protein 19
3swp_C5e-46616619168NAC domain-containing protein 19
3swp_D5e-46616619168NAC domain-containing protein 19
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00108PBMTransfer from AT4G35580Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV45352.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070419.10.0protein NTM1-like 9
RefseqXP_011070420.10.0protein NTM1-like 9
TrEMBLA0A2Z7CE790.0A0A2Z7CE79_9LAMI; Uncharacterized protein
STRINGMigut.A01059.1.p1e-161(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14316710
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.11e-113NAC transcription factor-like 9