PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV45341.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family C2H2
Protein Properties Length: 283aa    MW: 32084.1 Da    PI: 8.3078
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV45341.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.0004687109123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C+ C+k+F+++  L  H  +H
  KZV45341.1  87 FQCKSCKKVFNSHQALGGHRASH 109
                 89**************9999888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139121.4E-986111IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.28487114IPR007087Zinc finger, C2H2
SuperFamilySSF576672.93E-687109No hitNo description
SMARTSM003550.1787109IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028089109IPR007087Zinc finger, C2H2
SuperFamilySSF576672.93E-6153180No hitNo description
PROSITE profilePS501579.286158180IPR007087Zinc finger, C2H2
PfamPF139129.4E-12158181IPR007087Zinc finger, C2H2
SMARTSM003550.4158180IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280160180IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MSVLRNSGPQ NFKIKHEGNK HSYFLRGKTN RLVCYRASED KKSSSDKESE EEALANCLVM  60
LSNESLTFSS NVEEENKAKE MEINFTFQCK SCKKVFNSHQ ALGGHRASHK SVKGCSASNS  120
DLQTVDQNSN RDECEFLPQP DTLIATPPTS ARKMLKMHEC TICRRVFSSG QALGGHKRCH  180
WLTSVSSDNS FIPNHLHDFE YSHARQAYKT DRLIDLSRNL PVPQIGRNDA ADETKREEQR  240
IRAMNANEEK SCTERKLRKL SELGDVKLDR WLQVGIASCP DIC
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV45341.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081399.19e-69zinc finger protein ZAT1
TrEMBLA0A2Z7CE580.0A0A2Z7CE58_9LAMI; Uncharacterized protein
STRINGMigut.A00958.1.p8e-53(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19102243
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.15e-26C2H2-like zinc finger protein