PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV45211.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 320aa    MW: 35090.5 Da    PI: 6.7563
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV45211.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.46e-32110163255
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 pr+rWt++LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  KZV45211.1 110 PRMRWTSTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 163
                 9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.38E-15107164IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.9E-28108164IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-23110163IPR006447Myb domain, plants
PfamPF002495.4E-7111162IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0080060Biological Processintegument development
GO:0005618Cellular Componentcell wall
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MAADLSLQIS TPSVSSCTDQ LKESSTSSNG SDLSHENGFL TAGKGFSHMQ IEPNLGLGFE  60
NNLAGLLNHI PVQAPRNFHH YYQPQICGSR EFKRTARMVN GIAKRSVRAP RMRWTSTLHA  120
HFVHAVELLG GHERATPKSV LELMNVKDLT LAHVKSHLQM YRTVKSTERG TVENVADQGQ  180
TDFGLRLQVG GIEDDQTAHD INTHKMLISP MLAPPPLLLS SLQPNANALL DAQRISQPSV  240
RDGVRVTSRS IQVYSSSNIQ AGVDVTKVDG LETAHNLSVE EETLNDLNRP VSSQDLSINL  300
EFTLGRPSWE MDTSSALLTL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-17111165458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-17111165458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-17111165458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-17111165458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-17111165458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-17111165458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-17111165458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-17111165458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00107PBMTransfer from AT5G42630Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV45211.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083778.18e-98probable transcription factor KAN4
TrEMBLA0A2Z7CDS40.0A0A2Z7CDS4_9LAMI; Uncharacterized protein
STRINGXP_006434889.17e-75(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA122621822
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.12e-49G2-like family protein