PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV45208.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family B3
Protein Properties Length: 517aa    MW: 57257.3 Da    PI: 8.606
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV45208.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.16.5e-139683699
                EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                 tl  +sg+ W  +l     +++ ++++GW+ Fv+++ L++gDf+vF++dg+ ef  +v vf++
  KZV45208.1  9 ATLVGPSGNNWYAEL--ILIGDGLFFSDGWEAFVNDHFLEQGDFLVFRYDGDLEF--TVLVFDQ 68
                58899**********..55556699************************997666..9999986 PP
2B351.91.4e-16203297198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 f+kv+++ + + s  l +p +fa eh   ++++ ++ l +++g  W+v+ i  +k + ++++ +GW +Fv++n +++gD+++F+l++  +fel+v+++r
  KZV45208.1 203 FIKVMKRFNISGSYTLNIPYQFAMEHL--PKCKLKVLLHNLKGGCWTVNSIPnTKVQTSHTFCGGWLSFVRDNSIDVGDICIFELVR--KFELRVRILR 297
                 778888888888899********9996..348889***************874444555*************************986..999****998 PP
3B348.21.9e-15401490597
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 +++ +++ s  l +p +f  e+   ++ +++++l++++g+ W+v+ i + + ++ +++ +GW  Fv++n+++ gD+++F+l+g+ e   +v+v+
  KZV45208.1 401 MKKFNASGSYTLKIPYQFSVENL--PNFKTKIILRNLNGQCWTVNSIPTTRVRTlHTFCGGWMAFVRDNDIQIGDICIFELTGKCEM--RVHVC 490
                 5555566667899*****99994..346679***************7755555579999*********************9985555..66665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086313.507169IPR003340B3 DNA binding domain
SMARTSM010190.039169IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.108.1E-15871IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.96E-17971IPR015300DNA-binding pseudobarrel domain
PfamPF023622.0E-10968IPR003340B3 DNA binding domain
CDDcd100171.04E-121067No hitNo description
Gene3DG3DSA:2.40.330.101.4E-21195297IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.0E-22197297IPR015300DNA-binding pseudobarrel domain
CDDcd100171.86E-19201297No hitNo description
PROSITE profilePS5086312.901203299IPR003340B3 DNA binding domain
PfamPF023629.2E-14203297IPR003340B3 DNA binding domain
SMARTSM010192.7E-14203299IPR003340B3 DNA binding domain
SuperFamilySSF1019367.06E-23392489IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.2E-21393490IPR015300DNA-binding pseudobarrel domain
CDDcd100171.79E-19395490No hitNo description
PfamPF023621.3E-12397490IPR003340B3 DNA binding domain
PROSITE profilePS5086312.746397493IPR003340B3 DNA binding domain
SMARTSM010191.4E-10397495IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    Send to blast
MEGRALGAAT LVGPSGNNWY AELILIGDGL FFSDGWEAFV NDHFLEQGDF LVFRYDGDLE  60
FTVLVFDQNM CEKEAALKAE NHQAINKNGG YMVKKRDRDV STLPPSTVEC VPKRARCSEI  120
LSECAHKIHL GSTNIGGDNE GAQEADQSCG FNNAVTVAVS PCAAAQNRAD PSIRNRTTKL  180
DMSLSPLEAE RIARSFASSF PNFIKVMKRF NISGSYTLNI PYQFAMEHLP KCKLKVLLHN  240
LKGGCWTVNS IPNTKVQTSH TFCGGWLSFV RDNSIDVGDI CIFELVRKFE LRVRILRVRK  300
EGIGSHSSEA AHDGSINGLT TSTKASRRKS KIINKPSCDR GSVFSSQLDS CLIDSEIGNS  360
FGSADNRGSH TKGCMSMKSA PEEKIAAKYF VSSFPHFVRI MKKFNASGSY TLKIPYQFSV  420
ENLPNFKTKI ILRNLNGQCW TVNSIPTTRV RTLHTFCGGW MAFVRDNDIQ IGDICIFELT  480
GKCEMRVHVC AIGKKGLNYR NGTKNNAKPS DLEESLS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV45208.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083781.10.0B3 domain-containing protein Os01g0723500
RefseqXP_020551022.10.0B3 domain-containing protein Os01g0723500
TrEMBLA0A2Z7CE460.0A0A2Z7CE46_9LAMI; Uncharacterized protein
STRINGMigut.C00649.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA98202126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-14B3 family protein