PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV44611.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 281aa    MW: 31601.1 Da    PI: 5.7846
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV44611.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.13.2e-22117177159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dg++WrKYGqK +++ ++pr Y+rCt++  gC+++k+v+  +++p+++++tY  +H+++
  KZV44611.1 117 MEDGHAWRKYGQKIIQNFDHPRCYFRCTHKyqGCKATKQVQIIKQNPTLFQTTYFHQHTCK 177
                 58***************************999***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.2E-23109177IPR003657WRKY domain
PROSITE profilePS5081118.762112174IPR003657WRKY domain
SuperFamilySSF1182909.42E-23114177IPR003657WRKY domain
SMARTSM007743.1E-30117178IPR003657WRKY domain
PfamPF031067.2E-22118177IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MMNLSEDLRA RIMEAAITEL SKGKECAIQL QTLLQQPPED GGLASLDQLI LQISRSFANT  60
ISELRSGQIA ATGGGDGRLS LSSDIGGKRK EAAGPSRRGR YRRRKTTDSW TTLSEMMEDG  120
HAWRKYGQKI IQNFDHPRCY FRCTHKYQGC KATKQVQIIK QNPTLFQTTY FHQHTCKDSL  180
HLAAQLDSDP VDCNLISFQE NIVPLEDHSP NPINVPSPQS EYFTSNSTSD PWKDIFDLDP  240
AGDHKHEWGS LSGSYGEEVV SGYFQSFDHL GEMESFSFDE S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-18117177869OsWRKY45
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
187104KRKEAAGPSRRGRYRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV44611.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7CC160.0A0A2Z7CC16_9LAMI; Putative WRKY transcription factor 70
STRINGMigut.F00572.1.p2e-50(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61992233
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-25WRKY DNA-binding protein 70