PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV44403.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family MYB_related
Protein Properties Length: 288aa    MW: 30945.8 Da    PI: 9.5082
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV44403.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.21.1e-1497141347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++++ ++lG+g+W+ I+r     Rt+ q+ s+ qky
       KZV44403.1  97 PWTEEEHRKFLQGLQKLGKGDWRGISRNYVPSRTPTQVASHAQKY 141
                      8**************************9999*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129420.02490146IPR017930Myb domain
SuperFamilySSF466892.66E-1891147IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-1893145IPR006447Myb domain, plants
SMARTSM007176.3E-1294144IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.1E-1396140IPR009057Homeodomain-like
PfamPF002492.6E-1297141IPR001005SANT/Myb domain
CDDcd001671.15E-1197142No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MARCSNSQCD SNSPNSRNCS TKASTGIGGR EGGVRLFGVR LTDRSFIKKS ASMGNIISNC  60
SAAAAAESPE GYHSDDPAHG SAADAAFLRA QRKRGTPWTE EEHRKFLQGL QKLGKGDWRG  120
ISRNYVPSRT PTQVASHAQK YFIRQSNTAR RKKRSSLFDM APEMEAFSSS SPEKCSSQSL  180
VMNTDNEKHT VSSSHMMAGI DNSLPSLALT LKPAFMPLPF QLWPPNASSD YDGEAGNGMS  240
IPLMLMSSPV AQKEPVKEMV GISGISLGGT GTFTVEPSPL SLRLPGDP
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV44403.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072427.17e-91transcription factor MYBS3
TrEMBLA0A2Z7CCG70.0A0A2Z7CCG7_9LAMI; Uncharacterized protein
STRINGevm.model.supercontig_2092.12e-78(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA117701922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.16e-51MYB_related family protein