PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV40957.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 577aa    MW: 64671.9 Da    PI: 4.6695
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV40957.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.26.6e-5371351128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 lp+G+rF+Ptdeel+ +yL+ k++++++e+ +vi+e+d++k+ePwdLp  ++++++++ew+fF+++d+ky++g+r nrat++gyWkatgkd++++++kg
  KZV40957.1   7 LPVGYRFRPTDEELIGHYLRLKINRRDNEV-SVIREIDVCKWEPWDLPdlSAIESTDNEWFFFCPKDRKYQNGQRLNRATQKGYWKATGKDRNITTRKG 104
                 799************************999.99**************96448888999***************************************** PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                  ++g+kktLvfy+grap+g++t+Wv+heyr+
  KZV40957.1 105 VKIGMKKTLVFYTGRAPDGKRTNWVIHEYRA 135
                 *****************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-573158IPR003441NAC domain
PROSITE profilePS5100554.1657158IPR003441NAC domain
PfamPF023658.0E-278134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002230Biological Processpositive regulation of defense response to virus by host
GO:0002237Biological Processresponse to molecule of bacterial origin
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003713Molecular Functiontranscription coactivator activity
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    Send to blast
MAVMNALPVG YRFRPTDEEL IGHYLRLKIN RRDNEVSVIR EIDVCKWEPW DLPDLSAIES  60
TDNEWFFFCP KDRKYQNGQR LNRATQKGYW KATGKDRNIT TRKGVKIGMK KTLVFYTGRA  120
PDGKRTNWVI HEYRATDKSL DGTHPGQSAF VLSRLFKKTD LKQDEITESS NSDEVDGIVS  180
SPTIVTPNSA DDDQSETLTP VHNGSTERQP FSVGSFPTLN SCMDTVENPI PNPRQESSLI  240
ADKMEYDISG TAVLPHDLKL EMLLENLYSS PEQGAAPEWK MFSPLHSQVQ AELGSPYLYS  300
GFKNDINDQT NSPFQYETNA DEMMDDFLNS ILTDPMEQNT GGLYEVSSLE NPYYVNMLKL  360
DKDFISSGES EVEESPCQKY RSVPGGKLFE DDNKQEFPIQ GEVTSQVASV EASRSHVSPA  420
AGNETTLGTG IKIRARQPLQ QLSTQHYEAH GTAPRRIRLQ MKCQVGSVQC NLPKIVNEDD  480
KHEGSPHLAE GDNSDNVQTV VEESTRDNDS TNSTLSEDIS ATDLPKNFED TASSTSRYSI  540
TPSATSSLYM QKVLVAFSLI ALILGIFAYF KFPMATY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-41615816165NO APICAL MERISTEM PROTEIN
1ut4_B3e-41615816165NO APICAL MERISTEM PROTEIN
1ut7_A3e-41615816165NO APICAL MERISTEM PROTEIN
1ut7_B3e-41615816165NO APICAL MERISTEM PROTEIN
3swm_A4e-41615819168NAC domain-containing protein 19
3swm_B4e-41615819168NAC domain-containing protein 19
3swm_C4e-41615819168NAC domain-containing protein 19
3swm_D4e-41615819168NAC domain-containing protein 19
3swp_A4e-41615819168NAC domain-containing protein 19
3swp_B4e-41615819168NAC domain-containing protein 19
3swp_C4e-41615819168NAC domain-containing protein 19
3swp_D4e-41615819168NAC domain-containing protein 19
4dul_A3e-41615816165NAC domain-containing protein 19
4dul_B3e-41615816165NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV40957.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075874.10.0NAC domain-containing protein 62
TrEMBLA0A2Z7C2K70.0A0A2Z7C2K7_9LAMI; Uncharacterized protein
STRINGMigut.F00136.1.p1e-171(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33632448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24590.21e-91TCV-interacting protein