PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV39521.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

NAC

Protein Properties

Length: 294aa MW: 32694.1 Da PI: 6.4237

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV39521.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	86.8	4.1e-27	58	131	53	127
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 +++ewyfFs+r++kya+g+r+ ra+ +gyWka dk++++ + elvg++k L fy+gr p+g+kt+W+mhe+ KZV39521.1 58 LGDEEWYFFSSRERKYANGSRPDRAAGNGYWKANAADKKIHQ-NAELVGTRKCLDFYEGRPPNGRKTKWIMHEFV 131 3789***********************************9.999*************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	31.371	1	159	IPR003441	NAC domain
Pfam	PF02365	5.8E-13	40	130	IPR003441	NAC domain
SuperFamily	SSF101941	1.83E-30	57	158	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence Send to blast
MESDHQNPTV ANPNRGGASN TEGTLAIGEV LRADVYRPNK QLVTYHRRIT DGGLHQSLGD 60 EEWYFFSSRE RKYANGSRPD RAAGNGYWKA NAADKKIHQN AELVGTRKCL DFYEGRPPNG 120 RKTKWIMHEF VSAKQPPRQR TGPNDMRLDD CVLCRIHRSE YSTKRPEEQS SSAASECGKS 180 CKKNQAAPKC ARTEFQDTDK HLNPSRHAPL ELENLQKDRN TGASGDADQI NSNSGCDEHI 240 LAAALASREI ALVQMGGELP NCSAQKLFEE NLDTDMGAEN LEDEELGEIP KGPL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	2e-31	58	165	68	171	NO APICAL MERISTEM PROTEIN
1ut4_B	2e-31	58	165	68	171	NO APICAL MERISTEM PROTEIN
1ut7_A	2e-31	58	165	68	171	NO APICAL MERISTEM PROTEIN
1ut7_B	2e-31	58	165	68	171	NO APICAL MERISTEM PROTEIN
3swm_A	2e-31	58	165	71	174	NAC domain-containing protein 19
3swm_B	2e-31	58	165	71	174	NAC domain-containing protein 19
3swm_C	2e-31	58	165	71	174	NAC domain-containing protein 19
3swm_D	2e-31	58	165	71	174	NAC domain-containing protein 19
3swp_A	2e-31	58	165	71	174	NAC domain-containing protein 19
3swp_B	2e-31	58	165	71	174	NAC domain-containing protein 19
3swp_C	2e-31	58	165	71	174	NAC domain-containing protein 19
3swp_D	2e-31	58	165	71	174	NAC domain-containing protein 19
4dul_A	2e-31	58	165	68	171	NAC domain-containing protein 19
4dul_B	2e-31	58	165	68	171	NAC domain-containing protein 19

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV39521.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2Z7BY61	0.0	A0A2Z7BY61_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA746	24	103

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	5e-35	NAC-like, activated by AP3/PI