PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV36257.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 349aa    MW: 39976 Da    PI: 8.9924
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV36257.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.91.2e-50661903128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101
                 pGfrFhPtdeel+ +yL++kve+++++l + ik++diyk++PwdLpk+  ++++ewy+F+kr +ky+++ r+nr+t sg+Wkatg dk++++++g  +g
  KZV36257.1  66 PGFRFHPTDEELIGFYLRRKVEKRRISL-DLIKQADIYKYDPWDLPKSNIGGDNEWYYFCKRGRKYRNSVRPNRVTGSGFWKATGIDKPIYTSGGDFIG 163
                 9***************************.99***************76557899********************************************* PP

         NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                 lkk+Lvfy+g+a kg+kt+W+mhe+rl
  KZV36257.1 164 LKKSLVFYRGSAGKGTKTEWMMHEFRL 190
                 *************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100552.27564224IPR003441NAC domain
SuperFamilySSF1019414.84E-5564224IPR003441NAC domain
PfamPF023654.5E-2566190IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MLRSRALPED CVMTSRIQPG YVFRYLKNPG TIRLSLSERP DPRGSRRISR PRYPAPMEED  60
DCAPLPGFRF HPTDEELIGF YLRRKVEKRR ISLDLIKQAD IYKYDPWDLP KSNIGGDNEW  120
YYFCKRGRKY RNSVRPNRVT GSGFWKATGI DKPIYTSGGD FIGLKKSLVF YRGSAGKGTK  180
TEWMMHEFRL PPPSSHNKTT KQNLDAERIA QEAEVWTLCR VLKRNASNKK QYASASREAN  240
EKTSIHHINP VDESNSKACS VESSSQNGPI NYICFREPNF GRIEHQEPDF YHVKNAGSQQ  300
FLDHLTPPGT AASSSFASCV DEPYEDWEDI RSLVDPFASA GCYSNPFCF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-516623019171NO APICAL MERISTEM PROTEIN
1ut4_B5e-516623019171NO APICAL MERISTEM PROTEIN
1ut7_A5e-516623019171NO APICAL MERISTEM PROTEIN
1ut7_B5e-516623019171NO APICAL MERISTEM PROTEIN
3swm_A5e-516623022174NAC domain-containing protein 19
3swm_B5e-516623022174NAC domain-containing protein 19
3swm_C5e-516623022174NAC domain-containing protein 19
3swm_D5e-516623022174NAC domain-containing protein 19
3swp_A5e-516623022174NAC domain-containing protein 19
3swp_B5e-516623022174NAC domain-containing protein 19
3swp_C5e-516623022174NAC domain-containing protein 19
3swp_D5e-516623022174NAC domain-containing protein 19
4dul_A5e-516623019171NAC domain-containing protein 19
4dul_B5e-516623019171NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV36257.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022848325.11e-108transcription factor JUNGBRUNNEN 1-like isoform X2
TrEMBLA0A2Z7BVH70.0A0A2Z7BVH7_9LAMI; NAC domain-containing protein
STRINGMigut.M01549.1.p9e-99(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16972469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-82NAC domain containing protein 42