PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV36207.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 595aa    MW: 64698.1 Da    PI: 6.7803
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV36207.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.91.3e-30272329260
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                 dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk  ers   ++++e++Y+g+H+h+k
  KZV36207.1 272 DDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERSP-SGQITETVYKGSHDHPK 329
                 8****************************************.9**************85 PP
2WRKY106.21.7e-33414472159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
  KZV36207.1 414 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 472
                 59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081122.573266330IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.6E-25267330IPR003657WRKY domain
SuperFamilySSF1182905.75E-24270330IPR003657WRKY domain
SMARTSM007741.3E-32271329IPR003657WRKY domain
PfamPF031061.8E-23272328IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.0E-35405474IPR003657WRKY domain
SuperFamilySSF1182905.1E-29408474IPR003657WRKY domain
PROSITE profilePS5081138.825409474IPR003657WRKY domain
SMARTSM007743.1E-39414473IPR003657WRKY domain
PfamPF031063.6E-26415472IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009611Biological Processresponse to wounding
GO:0009961Biological Processresponse to 1-aminocyclopropane-1-carboxylic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    Send to blast
MYTTTPLGNA DTAPVHFPVV LKGPPLPPPP LCLMMEDFQS LSRSPSDNVS AHVTSTPEHV  60
PDGGSSVATD TALTGGCGSS NGAKYRLMSP AKLPISRSTC ITIPPGLSPT SFLESPVLLS  120
YVKAEPSPTT GSLFKPQLMQ QACENSVLSS EKICSRGSAV DGITSGDFKF KFLAGSTTAL  180
ELPSTGQAIP VGFTANRPFG QAQDQRFSQS QAPSSMATYG LSDLRVSAPM SVHESSACST  240
VDEFNHGRQL ATTVISDSKD SCPLATADRS SDDGYNWRKY GQKLVKGSEF PRSYYKCTYP  300
NCEVKKIFER SPSGQITETV YKGSHDHPKP QAARRQNSGA LISIQEEKLD QSLSFIVQED  360
KLNTSNLEPN VSLVLSPRKA NEDGIDGSGS QFLAIIDEGD EDDPVLKRSE VDILDDGYRW  420
RKYGQKVVRG NPNPRSYYKC TNAGCPVRKH VERASHDPKA VITTYEGKHN HDVPTARNNS  480
HEFAGNNPYT ITSKVRPEES NSLSLDLGVG ISRVAENRLN EQTRTSNAED RDRIVQHDSG  540
MKVIQQSPTC YGVVNGGLNL YENRENQVDV HSFQTLPIHP SNQCPQNPGR ILMGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-342724741277Probable WRKY transcription factor 4
2lex_A1e-342724741277Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00455DAPTransfer from AT4G26640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV36207.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095503.10.0probable WRKY transcription factor 20
TrEMBLA0A2Z7BVC40.0A0A2Z7BVC4_9LAMI; Putative WRKY transcription factor 20-like
STRINGXP_009591627.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40252344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.21e-133WRKY family protein