PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV36067.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family B3
Protein Properties Length: 649aa    MW: 71548 Da    PI: 5.3191
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV36067.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B366.93e-21514610295
                 EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
          B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                 +kvl++sdv+++gr+vlpkk ae+h  +++++ ++t+ +ed   +r+W++++++  ++ks++y+l+ ++ +Fvk ngL+egDf+v++ld  ++++++++
  KZV36067.1 514 QKVLKQSDVGNLGRIVLPKKEAENHlpELDTRDGVTIAMEDiGASRVWNMRYRFwpNNKSRMYLLE-NTGDFVKVNGLQEGDFIVIYLDT-KCGKYMIR 610
                 79*************************999***********7777*******99777777777777.********************976.88888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.3E-28507617IPR015300DNA-binding pseudobarrel domain
CDDcd100151.74E-33511612No hitNo description
SuperFamilySSF1019361.71E-23512609IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086310.898513615IPR003340B3 DNA binding domain
SMARTSM010194.4E-22513615IPR003340B3 DNA binding domain
PfamPF023621.4E-17514610IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 649 aa     Download sequence    Send to blast
MVEEGGEGGP PVSEHDRHSS GGEETVDTAA EAVVGEDSGG GGLEAMEMEE QGVVMGEKDF  60
WFEKEGETAL LDMNDASVLF GDFPSLPDLP CMSSSSSSST TPAPAQTIVA TTPSSSSAAS  120
SSPEASWAVP KRRRNHTALG HTIATDIAPP PPPTSDQDSI LDADCVDMME NLGYMDLIDS  180
NELWDPSSLF ENQEIVQGQA APPQKTQCQE DNDGFSFLRG NQELSMIFLD WLKQNKDHIS  240
AEDVRKIKLN RSTIENASKR LGRTKEGMKR LLKLILEWVE QYQLQKNGGR RVLESAAVVA  300
APPGLPPPAV GYCNFGGATY SNPPLAVPPA YPHHPQLMNM MPCTPSSEYQ LMNNAQSWTP  360
TPYNSIPMSP QFSHSADNGH PVSSYQQVFA RNPYQTCASN GEALVRSGSS VTKEARKNRM  420
ARQKRLYSNH HRHNNHKNQM DCSHLDPVSS PEDWMYSPVV DPASTPPTDT QVDAPEDQVK  480
PGSMQLQDFQ GESYSDRPQN GCSKTERNLK FLMQKVLKQS DVGNLGRIVL PKKEAENHLP  540
ELDTRDGVTI AMEDIGASRV WNMRYRFWPN NKSRMYLLEN TGDFVKVNGL QEGDFIVIYL  600
DTKCGKYMIR GVKVRQPEAK LDTGKPMGKR NAQNLSRARI RTSSGQAVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j9b_A1e-355096181110B3 domain-containing transcription factor FUS3
6j9b_D1e-355096181110B3 domain-containing transcription factor FUS3
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV36067.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016433829.11e-158PREDICTED: B3 domain-containing transcription factor ABI3-like
TrEMBLA0A2Z7BUZ20.0A0A2Z7BUZ2_9LAMI; Uncharacterized protein
STRINGXP_009628582.11e-155(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA42702339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24650.11e-122B3 family protein