PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV35078.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 409aa    MW: 45732 Da    PI: 8.4224
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV35078.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.49.2e-31146202259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dg++WrKYGqK+vkgse+prsYY+Ct+++C vkk ver+  d ++ e++Y+geHnh 
  KZV35078.1 146 SDGHSWRKYGQKQVKGSEYPRSYYKCTYPSCLVKKMVERTL-DDQIAEVVYKGEHNHL 202
                 7****************************************.99*************5 PP
2WRKY100.97.5e-32333390259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  Dg++WrKYGqK+vkg+ +prsYY+Ct ++C+v+k ver++edp ++++tYeg+Hnhe
  KZV35078.1 333 GDGFRWRKYGQKVVKGNSYPRSYYKCTNPKCNVRKFVERTSEDPATFITTYEGRHNHE 390
                 59*******************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.0E-28133204IPR003657WRKY domain
PROSITE profilePS5081123.066140204IPR003657WRKY domain
SuperFamilySSF1182901.96E-24144204IPR003657WRKY domain
SMARTSM007743.7E-34145203IPR003657WRKY domain
PfamPF031061.9E-24147201IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.3E-31323392IPR003657WRKY domain
PROSITE profilePS5081131.536327392IPR003657WRKY domain
SuperFamilySSF1182901.07E-27327392IPR003657WRKY domain
SMARTSM007741.5E-35332391IPR003657WRKY domain
PfamPF031066.0E-25334390IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009957Biological Processepidermal cell fate specification
GO:0010214Biological Processseed coat development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    Send to blast
MTKIREDDGT AVKKPIARRP DFSHYKSCSE LLSDAVKDSL PADVSENIVV PIRPTTVRYK  60
PTGKVEALAP KSDATSNVVY KPIAKFVTSA TLSVLANLGS NDNDPRQEEV DSCAKIPDLR  120
TNDLPVNSDE DKRILLPSNN GERAPSDGHS WRKYGQKQVK GSEYPRSYYK CTYPSCLVKK  180
MVERTLDDQI AEVVYKGEHN HLKPQGPACD AAQIEANNPV SNDQKADRIE SQANEPKDQI  240
SVESYTQLDY VGVSPRMNGP VMDVFFDISA STSNDVEKGE WEEGTEALGL ENDGSKSKRR  300
KSEIQSLKSG RAEKVTSEPG NGIKSNTERE IIGDGFRWRK YGQKVVKGNS YPRSYYKCTN  360
PKCNVRKFVE RTSEDPATFI TTYEGRHNHE MPTKIANPEV SRTRTRNKS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-29147392677Probable WRKY transcription factor 4
2lex_A1e-29147392677Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV35078.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094753.11e-122WRKY transcription factor 44-like
RefseqXP_011094754.11e-122WRKY transcription factor 44-like
RefseqXP_020553423.11e-122WRKY transcription factor 44-like
RefseqXP_020553424.11e-122WRKY transcription factor 44-like
TrEMBLA0A2Z7BNA20.0A0A2Z7BNA2_9LAMI; WRKY transcription factor 44
STRINGVIT_08s0040g03070.t011e-110(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA99512227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.18e-77WRKY family protein