PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV34689.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family C2H2
Protein Properties Length: 604aa    MW: 68269.4 Da    PI: 5.6129
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV34689.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00025575593220
                 EETTTTEEESSHHHHHHHH CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHi 20 
                 +C++Cg+ F ++  L++H+
  KZV34689.1 575 VCEKCGEEFETRNKLHKHL 593
                 7*****************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.287.1101.4E-21482IPR001623DnaJ domain
SuperFamilySSF465652.88E-21585IPR001623DnaJ domain
SMARTSM002715.5E-20769IPR001623DnaJ domain
PROSITE profilePS5007618.349877IPR001623DnaJ domain
CDDcd062571.75E-16866IPR001623DnaJ domain
PfamPF002263.1E-19974IPR001623DnaJ domain
PRINTSPR006252.4E-131028IPR001623DnaJ domain
PRINTSPR006252.4E-132843IPR001623DnaJ domain
PRINTSPR006252.4E-134969IPR001623DnaJ domain
PROSITE patternPS0063605473IPR018253DnaJ domain, conserved site
SuperFamilySSF576672.53E-13279335No hitNo description
SMARTSM004518.8E-4288322IPR003604Zinc finger, U1-type
PfamPF121715.9E-10291316IPR022755Zinc finger, double-stranded RNA binding
SMARTSM003556.3291315IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280293315IPR007087Zinc finger, C2H2
PROSITE profilePS501579.556574603IPR007087Zinc finger, C2H2
SMARTSM003552.6574598IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280576598IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 604 aa     Download sequence    Send to blast
MASTGKRCLY EVLGLSRECT ADEIRSAYKR LALQRHPDKL VQSGVSEADA TAAFQELVNA  60
YEVLSDARER AWYDSHRTQI LFSTSSSSKG SSDLVPDLFP FFSNSVYSGY TDSGKGFYKV  120
YGDLFERLYG SELGFAKKLG LDLPKEAPVL GNLESPYAQV TAFYKYWLGF ATSMDFCWAD  180
QYDVMAGPNR KSRRLMEEEN KKLRRKARRE FNETVRGLAE FVKKRDKRVI DMQVKRNEEM  240
ERNREEEKQR KKELDRQKAE RASNYTEPEW AKVEELDDEE AEEVDERKNE LYCVACGKKF  300
KTDKQWKNHE QSKKHKEKLA ELREAFIDED TVYKAAGGNG KAEEGHGDVD GDSVGLLSAD  360
EGLNDLEEQF KVNFGIREEE TCKDNAAGFS AAELFNDMDN GSGQKGVSAQ MESDDDETSF  420
LQTMVSGRKS RNRVGNKPKS PVSRIEAEVL SDELEFMEYN DTKGSRRSRG GRRRRKDRSQ  480
NEEVETSTTD AAAKNFQDKE QDGPVDTSLV EESVSNTLPE SETTSGGDDT RGRGQKDQQQ  540
AANKKSTIKK ENVSKSKVAS RGRKQKVATG DSGTVCEKCG EEFETRNKLH KHLGESGHAT  600
LKSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1200208KKLRRKARR
2471476RRRRKD
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV34689.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022886075.10.0DNAJ protein JJJ1 homolog isoform X2
SwissprotQ9C9111e-168JJJ1_ARATH; DNAJ protein JJJ1 homolog
TrEMBLA0A2G9H5330.0A0A2G9H533_9LAMI; Molecular chaperone (DnaJ superfamily)
STRINGMigut.D01668.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61101516
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74250.11e-158DNAJ heat shock N-terminal domain-containing protein