PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV33074.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family GRAS
Protein Properties Length: 472aa    MW: 54107.9 Da    PI: 7.0098
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV33074.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS301.61.9e-92864691373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lLl  A+ +++++ + a + L++l +++  +gd++qR+a yf+ +L arl+   s  y+ +   +t     +ee+ a+  +++vsP+++f+h+taN
  KZV33074.1  86 LIHLLLMSATLLNEKNVASAMENLTELYQNVCLTGDSIQRVAIYFADGLVARLLTRKSPFYNMIMKAPT----LDEEFLAFMELYKVSPFYQFAHFTAN 180
                 689****************************************************99999988776666....6899999999**************** PP

        GRAS 100 qaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlvakrledle 190
                 qaIlea+e+e     +++H+iDfd+s+G+QWp+Llq+L++++  ++  +++iTg+g+    s eel+et++rL +fA+++ ++ fef+ l +++ ++++
  KZV33074.1 181 QAILEAFEKEedtnnRALHVIDFDVSYGFQWPSLLQSLSEKAksDNRIRIKITGFGR----SLEELQETESRLVSFAKSFrNLVFEFHGL-VRSPSTMK 274
                 ********9988887788*********************9994344558899*****....9*****************857*******6.77788888 PP

        GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErel 289
                 l + + k++E++aVnlv +l +l   s s    ++++Lk v+s++P +vv+veqe  +n+++Fl rf+e+l+y++a+fdsl+  lp +s eri +Er  
  KZV33074.1 275 LVKPKNKKNETMAVNLVCHLNSLN--SFSE---ISDTLKYVNSIRPSIVVLVEQEGTRNTHNFLSRFVESLHYFAAIFDSLDDCLPLDSAERIRIERNH 368
                 88889999**********999997..3333...558*************************************************************** PP

        GRAS 290 lgreivnvvacega....errerhetlekWrerleeaGFkpvplsekaakqaklllrkvk...sdg........yrveee.sgslv.lgWkdrpLvsvS 371
                 lg+ei++v+ + ++    +   r e++e+W+ r+e+ GF+ ++ s+   +qaklll++ +     g        +rv e+ +g ++ lgW++r L+++S
  KZV33074.1 369 LGKEIKSVINHDHRllseNNSPRFEKMETWKCRMESHGFSGIRQSSVSIMQAKLLLKMRGhccPPGyndgenggFRVFERdEGRAIsLGWQERILITAS 467
                 **********99862222466799********************************9864212234111122236665444666667************ PP

        GRAS 372 aW 373
                 +W
  KZV33074.1 468 SW 469
                 ** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098549.30760437IPR005202Transcription factor GRAS
PfamPF035146.7E-9086469IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    Send to blast
MEGMDHHEEF LSLGLAVVAD YKSGGERKRK RKRKELDFPS DSSDEICEEG KLLSLLQLRE  60
QMMKIDHKII KGPLSDHHED GKGLHLIHLL LMSATLLNEK NVASAMENLT ELYQNVCLTG  120
DSIQRVAIYF ADGLVARLLT RKSPFYNMIM KAPTLDEEFL AFMELYKVSP FYQFAHFTAN  180
QAILEAFEKE EDTNNRALHV IDFDVSYGFQ WPSLLQSLSE KAKSDNRIRI KITGFGRSLE  240
ELQETESRLV SFAKSFRNLV FEFHGLVRSP STMKLVKPKN KKNETMAVNL VCHLNSLNSF  300
SEISDTLKYV NSIRPSIVVL VEQEGTRNTH NFLSRFVESL HYFAAIFDSL DDCLPLDSAE  360
RIRIERNHLG KEIKSVINHD HRLLSENNSP RFEKMETWKC RMESHGFSGI RQSSVSIMQA  420
KLLLKMRGHC CPPGYNDGEN GGFRVFERDE GRAISLGWQE RILITASSWC CV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_A3e-507947012379Protein SCARECROW
5b3h_A3e-507947011378Protein SCARECROW
5b3h_D3e-507947011378Protein SCARECROW
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12634RKRKRKRKE
22733KRKRKRK
32833RKRKRK
42834RKRKRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV33074.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022880415.10.0scarecrow-like protein 18
TrEMBLA0A2Z7BF730.0A0A2Z7BF73_9LAMI; Uncharacterized protein
STRINGMigut.N03341.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA123541823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.11e-54RGA-like 2