PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV32410.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 287aa    MW: 32468.8 Da    PI: 4.8262
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV32410.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH162.2e-05135180555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + +++r RR +i  ++  L++l P+      k  +Ka+ L ++v+ +k+Lq
  KZV32410.1 135 AYAADRSRRLKISLGLKALQDLFPHV-----KEGTKADLLDHVVDQVKYLQ 180
                 57899********************8.....569****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.59E-9128189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-8128189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.03E-5128184No hitNo description
PROSITE profilePS5088810.906130179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-4136185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MNNAFSDTGY IEELNHESAM KFVPVDLMAN NSFRLVNEDD ANQHYIVSQE SNGIFQVPVS  60
IPQLIWQTPQ NYVMFLAESG YPEIQKISGL ENHSQKQDRN EDYCNASQDY LGSVASATPL  120
KYRSEASRKR SKERAYAADR SRRLKISLGL KALQDLFPHV KEGTKADLLD HVVDQVKYLQ  180
DQVKDLCQSK LGGEPSSSSF IFLEGDGHYL VCEQMLIGSL EEMMGKLLEL YPSAALQLLQ  240
SRGLVLMPMA FAGELCESIR MLDMQVYYKL SFLRSSDLNN LYADSFT
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV32410.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012832524.13e-78PREDICTED: uncharacterized protein LOC105953408
RefseqXP_020550206.15e-79transcription factor bHLH66-like isoform X3
TrEMBLA0A2Z7BDV30.0A0A2Z7BDV3_9LAMI; Uncharacterized protein
STRINGMigut.D00274.1.p1e-77(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA96461617
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.17e-19LJRHL1-like 1