PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV32251.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HD-ZIP
Protein Properties Length: 304aa    MW: 34430.2 Da    PI: 4.5114
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV32251.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.51.1e-1876130357
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
    Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                 k++++++eq++ Le+ Fe ++++  e++ +LAk lgL+ rqV +WFqNrRa+ k+
  KZV32251.1  76 KKRRLSPEQVRLLEQSFEVENKLEPERKVQLAKDLGLQPRQVAIWFQNRRARCKN 130
                 56689***********************************************995 PP
2HD-ZIP_I/II126.41.2e-4075166192
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  ekkrrls eqv+lLE+sFe e+kLeperKv+la++Lglqprqva+WFqnrRAR k+k+lEk++++Lk++yd+lk++ ++L +e+e+Lr+e++
   KZV32251.1  75 EKKRRLSPEQVRLLEQSFEVENKLEPERKVQLAKDLGLQPRQVAIWFQNRRARCKNKHLEKEFDVLKSSYDRLKADCDTLYQENEKLRNEVR 166
                  69**************************************************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.89E-1965132IPR009057Homeodomain-like
PROSITE profilePS5007117.42771131IPR001356Homeobox domain
SMARTSM003892.6E-1974135IPR001356Homeobox domain
CDDcd000862.44E-1876132No hitNo description
PfamPF000467.6E-1676129IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.7E-1977138IPR009057Homeodomain-like
PRINTSPR000318.3E-6102111IPR000047Helix-turn-helix motif
PROSITE patternPS000270106129IPR017970Homeobox, conserved site
PRINTSPR000318.3E-6111127IPR000047Helix-turn-helix motif
PfamPF021837.0E-14131171IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MESGGVYDDS VVANVLLRNE MIPCTSDVLD SLWVPNSSHP FHGSTSMMNF EDMRAENIIV  60
EDGNQDFDEC FRHTEKKRRL SPEQVRLLEQ SFEVENKLEP ERKVQLAKDL GLQPRQVAIW  120
FQNRRARCKN KHLEKEFDVL KSSYDRLKAD CDTLYQENEK LRNEVRLLSA KSRKKPKKEP  180
YDPIVPSNVE PDKPIPTPNA AVSSVTPDSV APDAASSAKS DVCDSDSPDG NHSAAMLEPA  240
DSSHVFLETE HSDFSQDEDD SLGRGILSSS CFPKLETEWC DDLQPNSCNL GFPIQDQGTW  300
FWSY
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV32251.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071034.11e-121homeobox-leucine zipper protein HAT5-like
TrEMBLA0A2Z7BJU00.0A0A2Z7BJU0_9LAMI; Uncharacterized protein
STRINGXP_010242341.15e-90(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8252495
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.11e-40homeobox 1