PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV31698.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family MYB_related
Protein Properties Length: 515aa    MW: 55344.8 Da    PI: 4.4142
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV31698.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.44.3e-10202247145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwq 45 
                      r+ W++eEd +l  av+++G ++W+ Ia+    +gR++ ++  rw 
       KZV31698.1 202 RKDWSEEEDMKLTAAVQKYGEPDWANIAKGDFeNGRSASELFKRWT 247
                      788*************************954358999999999996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.119197254IPR017930Myb domain
SuperFamilySSF466891.08E-11198251IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.4E-14198253IPR009057Homeodomain-like
SMARTSM007172.6E-12201252IPR001005SANT/Myb domain
CDDcd001671.17E-10205249No hitNo description
PfamPF139213.9E-8205257No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    Send to blast
MADESKSSKK GSITEEDAAA LIQRYPVETV LTLLQEVERV AGDKIDWDEL VKNTATGISC  60
AREYQMLWRH LAYGQNLEDE IDSDAKPLAR ILFRLISLLN MNSVADDDSD LEYELEASPD  120
VTPQDSATAA ACVKLLIASG SKDSHLPDDS TIDAPLTITV RSTKAYTASD SSLPEYAVRG  180
TKVVVPVSVK KSTGGLTPRK NRKDWSEEED MKLTAAVQKY GEPDWANIAK GDFENGRSAS  240
ELFKRWTRLT KKLHNSNVGS SSQLSENDPS ASDGATPMDE TSNETKQINT GHPISEVPKR  300
MPPIKRTTIA DSVKAAAIAA GARIGTSTEA SSLVEASRSQ NVVHLKAAAG SVMRRYRARS  360
NEPPSNVPFI RDGMAKEPSS SYSAPVLSAA RADQPNPVGA ARVLSMSSEE TDSTASIPSV  420
EPTKHAEGST SGSGIRESAQ KDQMYYQYDS PISSPYNELA ESEESGYQAS SSSGDPGNDT  480
LDAHVPMECS EDEELGDEGV EAGSSNSMAT TEDEE
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV31698.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011084950.11e-116uncharacterized protein LOC105167083
RefseqXP_011084951.11e-116uncharacterized protein LOC105167083
TrEMBLA0A2Z7BHT70.0A0A2Z7BHT7_9LAMI; DNA binding protein
STRINGMigut.F01437.1.p9e-99(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34342237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.11e-48MYB_related family protein