PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV31691.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family M-type_MADS
Protein Properties Length: 327aa    MW: 36750 Da    PI: 4.6177
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV31691.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF529e-171963347
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                i+n+   + tfskRr gi KKA EL++LCd+++ +i+fs+t+  y
  KZV31691.1 19 IQNQDDLYATFSKRRLGIYKKATELCTLCDVDIGIILFSPTDVPY 63
                889999999*******************************97655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004323.3E-20968IPR002100Transcription factor, MADS-box
PROSITE profilePS5006620.128969IPR002100Transcription factor, MADS-box
SuperFamilySSF554552.22E-211082IPR002100Transcription factor, MADS-box
PRINTSPR004043.6E-121131IPR002100Transcription factor, MADS-box
PfamPF003191.7E-181965IPR002100Transcription factor, MADS-box
PRINTSPR004043.6E-123146IPR002100Transcription factor, MADS-box
PRINTSPR004043.6E-124667IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MAEGRRQTRG RQRIPMQLIQ NQDDLYATFS KRRLGIYKKA TELCTLCDVD IGIILFSPTD  60
VPYSFFHPRM ESVVSRSMNP QQPQSDYDRI IDSHARGRVD AMNRELDRII ADREAERVRF  120
QQAMDEIKTR TIWMRQSLDT LTKEQALMWR AWFVEFRDRV NHLIEKMKNE ASGSGMPQQE  180
AGQNVEGMVV PPPQGDFYYP GVQTPNDPHF GGGASSSHYY FPAPPPEGQN LFPQPFILPS  240
QELNLGPPGS DPSYNPYYVP PMAPDFPAAG GGDVPGEFYI PFQPYDFSTA GFSGQFYPPP  300
PLFDPAAGGA SNQDEAGPSN QNDDDAN
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV31691.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855808.14e-59PREDICTED: MADS-box transcription factor 21-like
TrEMBLA0A2Z7BI820.0A0A2Z7BI82_9LAMI; Uncharacterized protein
STRINGMigut.A00408.1.p2e-61(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38220138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01530.18e-24AGAMOUS-like 28