PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV30797.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family TCP
Protein Properties Length: 358aa    MW: 38107.8 Da    PI: 6.5304
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV30797.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP118.39.6e-37922032112
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..kaaksaaks 97 
                 a+ k++++++hTkv+gR+RR+R++a +aar+F+L++eLG+++d++ti WLl+ a+pai+e+tgt++++a ++  +++ +  +    s+  + a++++k+
  KZV30797.1  92 APPKRSSKDRHTKVEGRGRRIRMPAAVAARIFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTIPAIAVsVNGTLKIPTT--PSPaaADAPESPKK 188
                 7889****************************************************************965532222222222..22222333333344 PP

         TCP  98 kksqksaasalnlak 112
                 +++++s++++ ++++
  KZV30797.1 189 RRKRASNSEFCDVNH 203
                 444444444444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.9E-2997174IPR005333Transcription factor, TCP
PROSITE profilePS5136926.95598152IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0031347Biological Processregulation of defense response
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MASIFRHHLR RENLEPQEEH DVTTLSSDPL QRNGYTITAL DTAEADPSPP RDSEIPTLLK  60
DEPADTDLTG DLSVGWTASP PKEVKTVVSA AAPPKRSSKD RHTKVEGRGR RIRMPAAVAA  120
RIFQLTRELG HKSDGETIRW LLERAEPAII EATGTGTIPA IAVSVNGTLK IPTTPSPAAA  180
DAPESPKKRR KRASNSEFCD VNHSSNFAPV APIAPQGLVP VFPTGTFFMI PPTGPAASAV  240
PPIQPQFWAI PATATPVFNV SARPIQNFMT FGAPTGDTTS ATSYGGGESL AEPENSIKGG  300
VKEPATAMSP STANTANGTK GGTQILRDFS LEIYDKKELQ FMVGSDSSNL EQNPSSKP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186190KKRRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00667PBMTransfer from GSVIVG01027588001Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV30797.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076261.11e-132transcription factor TCP19
SwissprotQ9LT894e-69TCP19_ARATH; Transcription factor TCP19
TrEMBLA0A2Z7BA000.0A0A2Z7BA00_9LAMI; Uncharacterized protein
STRINGMigut.F00395.1.p1e-130(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51910.22e-67TCP family protein