PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV29977.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family TCP
Protein Properties Length: 427aa    MW: 47841.5 Da    PI: 7.5654
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV29977.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP151.55.4e-471252812135
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssa......sec...eaesssssasn 84 
                 +gkkdrhski+T++g RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL++++k+aikel ++       +   a      sec   +  ++ s    
  KZV29977.1 125 TGKKDRHSKICTAQGIRDRRMRLSLQVARKFFDLQDMLGFDKASKTIEWLFTKSKKAIKELEKDhphistsE---ArsesflSECevvSGLEEIS---- 216
                 79**************************************************************88775331...23333444442222222222.... PP

         TCP  85 sssg.................kaaksaakskksqksaasalnlakesrakarararertrekmriknk 135
                    +                  ++ +  ++ ++++++++ ++ ++esr+kararar rtrekm+ik+ 
  KZV29977.1 217 ---NidvkegmiispskhttePSCLNPSEKPEKRSKKTEDNSTMRESREKARARARSRTREKMMIKWC 281
                 ...133445567777766765333333333333333334577888********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036345.4E-46125277IPR005333Transcription factor, TCP
PROSITE profilePS5136937.462127185IPR017887Transcription factor TCP subgroup
PROSITE profilePS5137011.095258275IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MFPPSKSDNP LDFLLRRSSF LCDQQNPISK LQDEPVPFLF NFPSPFFDEH EMPLNQILTQ  60
SQIMAAAANH HHVVDQVENH NTVAKQNTAA SKSNGKEADQ GVNPNGINLT PLRRRNTSGV  120
PRKRTGKKDR HSKICTAQGI RDRRMRLSLQ VARKFFDLQD MLGFDKASKT IEWLFTKSKK  180
AIKELEKDHP HISTSEARSE SFLSECEVVS GLEEISNIDV KEGMIISPSK HTTEPSCLNP  240
SEKPEKRSKK TEDNSTMRES REKARARARS RTREKMMIKW CSKSNPNREN EDALKLESLT  300
SSCPFEGVDQ EARSLDQENK VSPFISHFDS IGEPLSSDEG TIEKLLGSSR TASSCPISDY  360
NHCSDSTAGC LDTNAHFMGF LGNWDLFTTE KITSSPSQFS ATNQAPFAGN PISVYSAPAP  420
NFQAFHQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV29977.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020552305.11e-118transcription factor TCP12-like
TrEMBLA0A2Z7BDF40.0A0A2Z7BDF4_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24362359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.12e-30TCP domain protein 12