PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV28942.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 562aa    MW: 63257.9 Da    PI: 4.4572
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV28942.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.22e-50111372128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                 ppGfrFhPtdeelv +yLk k+ +k+ +  +vi e+d+yk++P++Lp  +k+k++++ w+fFs+rd+ky++g r+nrat++gyWkatgkd+ ++  k++
  KZV28942.1  11 PPGFRFHPTDEELVLFYLKGKICRKRYRD-DVIGETDVYKWDPEELPglSKLKTGDRLWFFFSPRDRKYPNGARSNRATRHGYWKATGKDRVIMY-KSR 107
                 9*************************998.99***************6559999*****************************************.999 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                  vg+kktLvfy grap+ge+tdWvmhey++
  KZV28942.1 108 SVGIKKTLVFYGGRAPNGERTDWVMHEYTM 137
                 9***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.1E-568160IPR003441NAC domain
PROSITE profilePS5100553.98510160IPR003441NAC domain
PfamPF023651.1E-2611136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0070301Biological Processcellular response to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 562 aa     Download sequence    Send to blast
MDCFGNGNIF PPGFRFHPTD EELVLFYLKG KICRKRYRDD VIGETDVYKW DPEELPGLSK  60
LKTGDRLWFF FSPRDRKYPN GARSNRATRH GYWKATGKDR VIMYKSRSVG IKKTLVFYGG  120
RAPNGERTDW VMHEYTMDEE ELGRCENVHD YYALYKLYKK SGPGPKNGEQ YGAPFREEDW  180
ATDDLDVNYQ IDGDNSKKRV NDIVVNDDPK TVNCQPCPQP DELEEILNQL ENDSVLVPPH  240
SADFGYSLGQ FLGEVENQSS SMNHPSENTA FPFLQPCSQQ HRLQASFDLA QSDITQLINE  300
APEVTSQNLS GQERCLTEED FLEMNDLIGP EPNLQNLVGS VDNLEFDEFD CLGEIDQYHD  360
AALFFSEMGH GESGEISQPQ GNYYDNVGMD PVTSSFLNNL ENGTVNYQWT DEQRCANFTA  420
TEANQMSISS STSGLILQNQ THNHNLGGVI NFTTGANENQ NNKQDGDTDS WFSSALWSFV  480
ESIPTTPASA SENALVNRAF ERMSSFSRIR LNARNMNFAT GNTSASSRIS GKSISGFICF  540
FSVGVLCAVL WMMVGTSVRV SL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-461013715140Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00179DAPTransfer from AT1G34190Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV28942.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074131.10.0NAC domain-containing protein 17-like
TrEMBLA0A2Z7B3I80.0A0A2Z7B3I8_9LAMI; Uncharacterized protein
STRINGXP_009613291.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32122451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.11e-134NAC domain containing protein 17