PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV28891.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

bZIP

Protein Properties

Length: 393aa MW: 42391.6 Da PI: 10.2519

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV28891.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.4	1e-15	326	369	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r+rr++kNRe+A rsR+RK+a++ eLe ++++L++eN++L+k+ KZV28891.1 326 RRQRRMIKNRESAARSRARKQAYTMELEAEIAKLKEENDELRKK 369 79****************************************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.2E-13	322	384	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.208	324	369	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.56E-11	326	370	No hit	No description
Pfam	PF00170	1.3E-12	326	369	IPR004827	Basic-leucine zipper domain
CDD	cd14707	3.80E-26	326	371	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.8E-15	326	370	No hit	No description
PROSITE pattern	PS00036	0	329	344	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence Send to blast
FRNRSFSRGG EGGTPPGNFP LARQSSIYSL TFDEFQSTAG GIGKDLGSMN MDELLKSIWN 60 AEENLIVGSS SGGDVRIQEG VNHLQRQGSL TLPRTLSQKT VDEVWRNVSK EYGSGGGGFG 120 MLPREPTLGE VTLEEFLVKA GVVREETQPA AMLRNLGVFD NRSIPNIPGS EFGFQQTGRD 180 ARLLMANRTA NSTNQIPLES ANLPVNVNGV RSSASPQPVH QPQLLPKQPG FALGISGNQL 240 GNSGIRGGIV SDVAMNNNNM AQNMKLHGGG PGVVNFGANE KGSPSVSSDG QVNSTGGTSS 300 ASPVPYMFNG GVRGRKRAAL EKVVERRQRR MIKNRESAAR SRARKQAYTM ELEAEIAKLK 360 EENDELRKKQ VHNFNLSLEC VLQSVLQSVL QSL

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence Send to blast

FRNRSFSRGG EGGTPPGNFP LARQSSIYSL TFDEFQSTAG GIGKDLGSMN MDELLKSIWN  60
AEENLIVGSS SGGDVRIQEG VNHLQRQGSL TLPRTLSQKT VDEVWRNVSK EYGSGGGGFG  120
MLPREPTLGE VTLEEFLVKA GVVREETQPA AMLRNLGVFD NRSIPNIPGS EFGFQQTGRD  180
ARLLMANRTA NSTNQIPLES ANLPVNVNGV RSSASPQPVH QPQLLPKQPG FALGISGNQL  240
GNSGIRGGIV SDVAMNNNNM AQNMKLHGGG PGVVNFGANE KGSPSVSSDG QVNSTGGTSS  300
ASPVPYMFNG GVRGRKRAAL EKVVERRQRR MIKNRESAAR SRARKQAYTM ELEAEIAKLK  360
EENDELRKKQ VHNFNLSLEC VLQSVLQSVL QSL

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV28891.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011074426.1	1e-135	bZIP transcription factor 23
Refseq	XP_011074427.1	1e-135	bZIP transcription factor 23
Swissprot	Q9M7Q4	1e-101	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A2Z7B3D6	0.0	A0A2Z7B3D6_9LAMI; Abscisic acid responsive elements-binding factor 2 isoform 1 (Fragment)
STRING	XP_010538116.1	1e-115	(Tarenaya hassleriana)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA776	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	9e-88	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]