PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV25711.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 224aa    MW: 25719 Da    PI: 10.2075
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV25711.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2331.5e-10108149351
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                  +GV+  k + +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  KZV25711.1 108 MRGVYL-K-NAKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 149
                 79**85.4.67********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510328.51896162IPR001471AP2/ERF domain
SuperFamilySSF541713.47E-8107152IPR016177DNA-binding domain
PfamPF008476.6E-5107150IPR001471AP2/ERF domain
SMARTSM003807.7E-5107164IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-6109154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MVSIRRRRLL GVSSGRNPVF APFPRGFEHG QTPETGLESA RQGIVRPLFS SNIDIPKEES  60
TLDDVTGSSK ASRTILQEDD NLFQQFPEIK RRKRHRRKHV ENQEPCIMRG VYLKNAKWQA  120
AIKVDKKQIH LGTVGSQEEA ARLYDRAAFM CGREPNFELS EEEKRELKKF NWEEFLAMTR  180
SAISYKKVQR RTGPASQRKH QNNDSEGEQA RSGFSASEDD TLVL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV25711.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089071.14e-92ethylene-responsive transcription factor-like protein At4g13040 isoform X2
RefseqXP_011089072.14e-92ethylene-responsive transcription factor-like protein At4g13040 isoform X2
TrEMBLA0A2Z7AUX11e-165A0A2Z7AUX1_9LAMI; Uncharacterized protein
STRINGPOPTR_0002s24750.49e-74(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA62462433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.21e-39ERF family protein