PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV22577.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 564aa    MW: 63181.8 Da    PI: 4.4675
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV22577.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.72.3e-53161431128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 l+pGfrFhPtdeelv +yL++kv gk++++ ++i+e+diyk+ePwdLp + ++k+++ ewyfFs  d+ky +g r+nrat++gyWk+tgkd+ev++ k+
  KZV22577.1  16 LAPGFRFHPTDEELVRYYLRRKVCGKTFQM-DAIAEIDIYKAEPWDLPsMsRLKSRDLEWYFFSVLDRKYGNGARTNRATENGYWKTTGKDREVYH-KK 112
                 579***************************.99***************5247778888**************************************.99 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 + vg kktLv+++grapkg++++Wvmheyrl
  KZV22577.1 113 NIVGFKKTLVYHNGRAPKGQRSNWVMHEYRL 143
                 99***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-6112166IPR003441NAC domain
PROSITE profilePS5100558.12616166IPR003441NAC domain
PfamPF023652.4E-2718143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009819Biological Processdrought recovery
GO:0010150Biological Processleaf senescence
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000377Biological Processregulation of reactive oxygen species metabolic process
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 564 aa     Download sequence    Send to blast
MESASKKKSS ASSNLLAPGF RFHPTDEELV RYYLRRKVCG KTFQMDAIAE IDIYKAEPWD  60
LPSMSRLKSR DLEWYFFSVL DRKYGNGART NRATENGYWK TTGKDREVYH KKNIVGFKKT  120
LVYHNGRAPK GQRSNWVMHE YRLADLELEG AGISQDAFVL CRVFQKSGSG PKNGEQYGAP  180
FMEEEWENDE LESVPKVEAF EEEDFGGDAY LDGNYLEQIL GSDASSDITH PQLNFQSADG  240
SHGGETAESL SDTKTTQKLL DGADQLYYGP EQLDDTNLHA LPTPSDVNIN IVKHEYIGES  300
SKYENSEDVD YLLDEPFLDS TDYLPFGDEG FIEANDLSNP VEANTSTYDM FEEYLTYFDA  360
SADYSQNFAP DPSAILEDEG ALVPDYASLY QKESNEVTNQ DVPSGQIVNN DNSASPSHNQ  420
EPPKYQSDFN YPFIKQASQM LGNIHAPPAF AEEFPLKNAT MHFNSMPQSS SSVHFTAGMI  480
QLRNLTVGNN GTVPTSHKHE NLNIILSFGF SRGEDGPANL VSRVSIHPGK TVSAITRDWL  540
SIIFLFVVFV LSMSFKMGVH ICAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-471617217171NO APICAL MERISTEM PROTEIN
1ut4_B3e-471617217171NO APICAL MERISTEM PROTEIN
1ut7_A3e-471617217171NO APICAL MERISTEM PROTEIN
1ut7_B3e-471617217171NO APICAL MERISTEM PROTEIN
3ulx_A3e-4761724174Stress-induced transcription factor NAC1
4dul_A3e-471617217171NAC domain-containing protein 19
4dul_B3e-471617217171NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00343DAPTransfer from AT3G10500Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV22577.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076897.10.0NAC domain-containing protein 53 isoform X1
TrEMBLA0A2Z7AT950.0A0A2Z7AT95_9LAMI; NAC domain-containing protein 78-like
STRINGMigut.F01913.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31412450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.11e-123NAC domain containing protein 53