PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV21777.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family C2H2
Protein Properties Length: 265aa    MW: 28859.5 Da    PI: 9.2622
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV21777.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.00072109131123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y C+ C+++Fs+   L  H  +H
  KZV21777.1 109 YACKTCDRVFSSFQALGGHRASH 131
                 89**********99999998887 PP
2zf-C2H214.40.00011183205123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++Cg  F++   L  H+r+H
  KZV21777.1 183 HECSYCGAEFTSGQALGGHMRRH 205
                 78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576679.6E-9108131No hitNo description
SMARTSM003550.15109131IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.388109136IPR007087Zinc finger, C2H2
PfamPF139123.2E-11109133IPR007087Zinc finger, C2H2
PROSITE patternPS000280111131IPR007087Zinc finger, C2H2
SuperFamilySSF576679.6E-9178205No hitNo description
Gene3DG3DSA:3.30.160.600.001181205IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003550.0098183205IPR015880Zinc finger, C2H2-like
PfamPF139121.3E-12183207IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.281183210IPR007087Zinc finger, C2H2
PROSITE patternPS000280185205IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MEATAGPPNK DISSPSIAKG KRTKRLRVLS PIPLTVAPPL FLEDNTNNHQ YPIPSAAVSA  60
ASSEESTTTE EEDTARCLIL LANGHFSPTK QIVPIRDGNK TNKKAGAMYA CKTCDRVFSS  120
FQALGGHRAS HKKPKNEKKS SSTSLFMSDE EDFPSPSISS YKSRMSLSLQ LNSTTANASP  180
RIHECSYCGA EFTSGQALGG HMRRHRASGP ISPLSRPPMP TAHSKEFDFE LGIKPKNGFP  240
LDLNLPAPED EHQRCFGFDS KQQKS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV21777.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077260.16e-71zinc finger protein ZAT5
TrEMBLA0A2Z7AQZ90.0A0A2Z7AQZ9_9LAMI; Uncharacterized protein
STRINGMigut.F01919.1.p3e-57(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40152343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03510.19e-42C2H2 family protein