PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV19507.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 299aa    MW: 33426.2 Da    PI: 7.5019
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV19507.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.75e-1486172455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC......................................TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkas...................................kapskKlsKaeiLekAveYIksLq 55 
                 + n  Er+RR+ri +++ +L+ellP++s                                   + p++ ls a++L k++eYIk Lq
  KZV19507.1  86 KRNTCERKRRSRIADRMKTLQELLPNCSykvrpskrparnppvvgrvgklpnitclltwwrevGRPNELLSAASVLDKTIEYIKTLQ 172
                 46999*********************999**********************************99*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.66E-1280112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.01E-880174No hitNo description
PROSITE profilePS5088812.63982171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.7E-1186172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-1386112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.5E-888177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-13151182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-12152186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MNPHLLDFNS TSTPSTLQGR LSWNQPPLEQ QYSNPHLISE GTQMEEHSDS RLHFTPEAEV  60
TIGPRAMAEY EEACRNKKRK GKEVEKRNTC ERKRRSRIAD RMKTLQELLP NCSYKVRPSK  120
RPARNPPVVG RVGKLPNITC LLTWWREVGR PNELLSAASV LDKTIEYIKT LQLQTAVLGY  180
QQMMMDGQLI PAQNFLPRES AWDNLTDPIL MTNYGGIIPA GIDQESTINP STHPGLSYGS  240
DGIFSSVTWS MPDSEFLLQK PMPGQLFDAF GGLPLASVAA SQPVSLPLEL VSSPLDKLL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17794KRKGKEVEKRNTCERKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV19507.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7ACQ00.0A0A2Z7ACQ0_9LAMI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.15e-08LJRHL1-like 1